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BaseInfo

ncRNA ID	novel_jre_miR854
Species	Juglans regia
Class	miRNA
Genome position	NW_017401196.1:447-573 [-]
Reference genome	wgs.5d
Source	SRR1170966
Length	23
Mature sequence(if miRNA)	105 - AAUAGACAAGCCCCAUACAAGCC - 127
Stem-loop(if miRNA)	--          C           -CCUA      -AAG   A   CACCU    --AA   GUA   AAUAGACAAG CCCAUACAAGC     GUAAAA    UGG CCC     UAAA    AGU   A   |||||||||| |||||||||||     ||||||    ||| |||     ||||    |||   A   UUAUCUGUUC GGGUAUGUUCG     CAUUUU    ACC GGG     AUUU    UCA   A GU          A           UAAAA      GUUA   A   UAAUU    AUUA   AAA
Stem-loop sequence	AAUAGACAAGCCCCAUACAAGCCCUAGUAAAAAAGUGGACCCCACCUUAAAAAAGUGUAAAAAAAACUAUUAUUUAUUAAUGGGACCAAUUGUUUUACAAAAUGCUUGUAUGGGACUUGUCUAUUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018979504.1	ncRNA:23   CCGAACAUACCCCGAACAGAUAA   1   |||||||||*|||*||||||||| targets:2651   GGCUUGUAUAGGGAUUGUCUAUU   2673 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC109001971 (LOC109001971), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018979503.1	ncRNA:23   CCGAACAUACCCCGAACAGAUAA   1   |||||||||*|||*||||||||| targets:2781   GGCUUGUAUAGGGAUUGUCUAUU   2803 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC109001971 (LOC109001971), transcript variant X1, mRNA	NA	coding protein	psRNATarget