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BaseInfo

ncRNA ID	novel_jre_miR853
Species	Juglans regia
Class	miRNA
Genome position	NW_017397702.1:521-671 [+]
Reference genome	wgs.5d
Source	SRR1170966
Length	24
Mature sequence(if miRNA)	128 - CUUGCGCAUUCCACGACUGUAUGU - 151
Stem-loop(if miRNA)	--U          -  C      U                       -    -AAUAAAUA   GACCUACCUGAAA    UGCAGUCGUG AG GUGCAG CGCCGUGCAGUCGCUUUGAAAAA AGUG         AGG             A    |||||||||| || |||||| ||||||||||||||||||||||| ||||         |||    AUGUCAGCAC UU CGCGUU GCGGCACGUCAGCGAAACUUUUU UCAC         UAA             G UGU          C  A      C                       C    CCCAAGUGA   UUUUUUAAUUAAA
Stem-loop sequence	UUGCAGUCGUGAGCGUGCAGUCGCCGUGCAGUCGCUUUGAAAAAAGUGAAUAAAUAAGGGACCUACCUGAAAAGAAAUUAAUUUUUUAAUAGUGAACCCCACUCUUUUUCAAAGCGACUGCACGGCGCUUGCGCAUUCCACGACUGUAUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018994468.1	ncRNA:24   UGUAUGUCAGCACCUUACGCGUUC   1   |||||||||||||||=|||||||| targets:1431   ACAUACAGUCGUGGAGUGCGCAAG   1454 Target Full Sequence	1.5	PREDICTED: Juglans regia serine/threonine-protein phosphatase PP1-like (LOC109012694), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_018983089.1	ncRNA:24   UGUAUGUCAGCACCUUACGCGUUC   1   ||=|||=||||||||||||||||* targets:281   ACGUACGGUCGUGGAAUGCGCAAA   304 Target Full Sequence	2.0	PREDICTED: Juglans regia putative transporter arsB (LOC109004518), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_018983090.1	ncRNA:24   UGUAUGUCAGCACCUUACGCGUUC   1   ||=|||=||||||||||||||||* targets:281   ACGUACGGUCGUGGAAUGCGCAAA   304 Target Full Sequence	2.0	PREDICTED: Juglans regia putative transporter arsB (LOC109004518), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_018983086.1	ncRNA:24   UGUAUGUCAGCACCUUACGCGUUC   1   ||=|||=||||||||||||||||* targets:281   ACGUACGGUCGUGGAAUGCGCAAA   304 Target Full Sequence	2.0	PREDICTED: Juglans regia putative transporter arsB (LOC109004518), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018964869.1	ncRNA:24   UGUAUGUCAGCACCUUACGCGUUC   1   |||||||||=*||||||||||||| targets:1058   ACAUACAGUUAUGGAAUGCGCAAG   1081 Target Full Sequence	2.0	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC108990784), mRNA	NA	coding protein	psRNATarget
XM_018980788.1	ncRNA:24   UGUAUGUCAGCACCUUACGCGUUC   1   |||||||||=*||||||||||||| targets:1587   ACAUACAGUUAUGGAAUGCGCAAG   1610 Target Full Sequence	2.0	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC109002870), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_018980787.1	ncRNA:24   UGUAUGUCAGCACCUUACGCGUUC   1   |||||||||=*||||||||||||| targets:1660   ACAUACAGUUAUGGAAUGCGCAAG   1683 Target Full Sequence	2.0	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC109002870), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018980786.1	ncRNA:24   UGUAUGUCAGCACCUUACGCGUUC   1   |||||||||=*||||||||||||| targets:1884   ACAUACAGUUAUGGAAUGCGCAAG   1907 Target Full Sequence	2.0	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC109002870), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018974968.1	ncRNA:24   UGUAUGUCAGCACCUUACGCGUUC   1   |||||||||||||*|||||||||* targets:1096   ACAUACAGUCGUGAAAUGCGCAAA   1119 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC108998416 (LOC108998416), mRNA	NA	coding protein	psRNATarget