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BaseInfo

ncRNA ID	novel_jre_miR847
Species	Juglans regia
Class	miRNA
Genome position	NW_017389861.1:12829-12943 [-]
Reference genome	wgs.5d
Source	SRR1170966
Length	24
Mature sequence(if miRNA)	1 - UUUUUUAAAGAGAUUGCGCGGCGC - 24
Stem-loop(if miRNA)	--   A       G             -A  AUCCAUUAUUAAAAAAUUAGUUUUUAU   GCC UGCAAUC UUUUGAAAAAAGU  GA                           U   ||| ||||||| |||||||||||||  ||   CGG GCGUUAG GAAAUUUUUUUUA  CA                           U CG   C       A             CU  UUUAUGCCUUGGGUGUACUUUUUUAUU
Stem-loop sequence	GCCAUGCAAUCGUUUUGAAAAAAGUAGAAUCCAUUAUUAAAAAAUUAGUUUUUAUUUUUAUUUUUUCAUGUGGGUUCCGUAUUUACUCAUUUUUUUUAAAGAGAUUGCGCGGCGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_019003364.1	ncRNA:24   CG--CG--GCGCGUUAGAGAAAUUUUUU   1   ||--||--=|=||||||*|||||||||| targets:1497   GCAAGCAAUGUGCAAUCGCUUUAAAAAA   1524 Target Full Sequence	2.5	PREDICTED: Juglans regia polygalacturonase-like (LOC109020835), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_019003363.1	ncRNA:24   CG--CG--GCGCGUUAGAGAAAUUUUUU   1   ||--||--=|=||||||*|||||||||| targets:1503   GCAAGCAAUGUGCAAUCGCUUUAAAAAA   1530 Target Full Sequence	2.5	PREDICTED: Juglans regia polygalacturonase-like (LOC109020835), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_019003362.1	ncRNA:24   CG--CG--GCGCGUUAGAGAAAUUUUUU   1   ||--||--=|=||||||*|||||||||| targets:1542   GCAAGCAAUGUGCAAUCGCUUUAAAAAA   1569 Target Full Sequence	2.5	PREDICTED: Juglans regia polygalacturonase-like (LOC109020835), transcript variant X2, mRNA	NA	coding protein	psRNATarget