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BaseInfo

ncRNA ID novel_jre_miR844
Species Juglans regia
Class miRNA
Genome position NW_017389741.1:174465-174579 [+]
Reference genome wgs.5d
Source SRR1170966
Length 24
Mature sequence(if miRNA) 1 - AAACGUCGUGCAUUCACUUUGAAA - 24
Stem-loop(if miRNA) --AAA         U  AC           --------A          C   UAA     UA
     CGUCGUGCA UC  UUUGAAAAAAG         GUGGGAUCUA UAU   AAAAU  A
     ||||||||| ||  |||||||||||         |||||||||| |||   |||||
     GCGGCACGU AG  AAAUUUUUUUU         UACCCUAGGU AUA   UUUUA  U
CGUUC         C  CA           ACUUAUUUA          -   --C     UU
Stem-loop sequence AAACGUCGUGCAUUCACUUUGAAAAAAGAGUGGGAUCUACUAUUAAAAAAUUAAUUUAUUUUCAUAUGGAUCCCAUAUUUAUUCAUUUUUUUUAAAACGACUGCACGGCGCUUGC