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BaseInfo

ncRNA ID	novel_jre_miR842
Species	Juglans regia
Class	miRNA
Genome position	NW_017443009.1:2312710-2312807 [+]
Reference genome	wgs.5d
Source	SRR1168880;SRR1170970
Length	24
Mature sequence(if miRNA)	75 - UUUCAAAAUGAUUACGCGGCGUUU - 98
Stem-loop(if miRNA)	--GU      C     C   --         UACAG  UAGUAU       UU     GUCGUG AGUCG UUU  AAAAAAUAA     UC      UGAGAAA  A     |||||| ||||| |||  |||||||||     ||      |||||||     CGGCGC UUAGU AAA  UUUUUUAUU     AG      ACUUUUU  A UUUG      A     A   CU         ---UA  ---UAU       UU
Stem-loop sequence	GUGUCGUGCAGUCGCUUUAAAAAAUAAUACAGUCUAGUAUUGAGAAAUUAAUUUUUUUCAUAUGAAUUUAUUUUUUUCAAAAUGAUUACGCGGCGUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018994005.1	ncRNA:24   UUUGCGGCGCAUUAGUAAAACUUU   1   ||||*=|||||||||||||||||| targets:1004   AAACAUCGCGUAAUCAUUUUGAAA   1027 Target Full Sequence	1.0	PREDICTED: Juglans regia dnAJ-like protein slr0093 (LOC109012397), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018994004.1	ncRNA:24   UUUGCGGCGCAUUAGUAAAACUUU   1   ||||*=|||||||||||||||||| targets:1326   AAACAUCGCGUAAUCAUUUUGAAA   1349 Target Full Sequence	1.0	PREDICTED: Juglans regia dnAJ-like protein slr0093 (LOC109012397), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018986207.1	ncRNA:24   UUUGCGGCGCAUUAGUAAAACUUU   1   |||||||*||||||=||||||||| targets:1635   AAACGCCACGUAAUUAUUUUGAAA   1658 Target Full Sequence	2.5	PREDICTED: Juglans regia vacuolar amino acid transporter 1-like (LOC109006810), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018986206.1	ncRNA:24   UUUGCGGCGCAUUAGUAAAACUUU   1   |||||||*||||||=||||||||| targets:1809   AAACGCCACGUAAUUAUUUUGAAA   1832 Target Full Sequence	2.5	PREDICTED: Juglans regia vacuolar amino acid transporter 1-like (LOC109006810), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018986205.1	ncRNA:24   UUUGCGGCGCAUUAGUAAAACUUU   1   |||||||*||||||=||||||||| targets:1890   AAACGCCACGUAAUUAUUUUGAAA   1913 Target Full Sequence	2.5	PREDICTED: Juglans regia vacuolar amino acid transporter 1-like (LOC109006810), transcript variant X1, mRNA	NA	coding protein	psRNATarget