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BaseInfo

ncRNA ID novel_jre_miR832
Species Juglans regia
Class miRNA
Genome position NW_017389484.1:123744-123871 [-]
Reference genome wgs.5d
Source SRR1170966
Length 21
Mature sequence(if miRNA) 1 - AGGCAGUCUCCUUGGCUAACG - 21
Stem-loop(if miRNA) ---          U    U     -CA   U        G      UUAAAAA   AGGGAGGGCCGUG
   UAGCCAAGGA GACU GCCUG   GCC UACGAGGA CCUUAA       GGU             A
   |||||||||| |||| |||||   ||| |||||||| ||||||       |||             U
   AUCGGUUCCU CUGA CGGAC   UGG AUGUUCCU GGAAUU       UUG             C
GCA          -    -     AUA   U        A      -------   GGACAGUUUAUAC
Stem-loop sequence UAGCCAAGGAUGACUUGCCUGCAGCCUUACGAGGAGCCUUAAUUAAAAAGGUAGGGAGGGCCGUGAUCCAUAUUUGACAGGGUUUUAAGGAUCCUUGUAUGGUAUACAGGCAGUCUCCUUGGCUAACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019003092.1
ncRNA:21   GCAAUCGGUUCCUCUGACGGA   1
  **||*|==|||||||||||||
targets:3892   AUUUUGUUAAGGAGACUGCCU   3912

3.0 PREDICTED: Juglans regia probable inactive receptor kinase At5g10020 (LOC109020593), transcript variant X1, mRNA NA coding protein psRNATarget