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BaseInfo

ncRNA ID novel_jre_miR831
Species Juglans regia
Class miRNA
Genome position NW_017389459.1:39017-39107 [-]
Reference genome wgs.5d
Source SRR1170966
Length 24
Mature sequence(if miRNA) 1 - AUCACAUGAAACUACGUCAGUUUG - 24
Stem-loop(if miRNA) --      UA   C  G  A             UAUAAAAU      UA
  AAUUGA  UAG UU GU UGGUUUGUCAGAU        UAUUUU  U
  ||||||  ||| || || |||||||||||||        ||||||
  UUGACU  AUC AA UA ACUAGACAGUCUA        AUAAAA  C
GU      GC   A  G  C             -------C      UA
Stem-loop sequence AAUUGAUAUAGCUUGGUAUGGUUUGUCAGAUUAUAAAAUUAUUUUUAUCAUAAAAUACAUCUGACAGAUCACAUGAAACUACGUCAGUUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018970097.1
ncRNA:24   GUUUGACUGCAUCAAAGUACACUA   1
  ||||||||||*||*||||||||||
targets:2605   CAAACUGACGCAGCUUCAUGUGAU   2628

2.5 PREDICTED: Juglans regia GBF-interacting protein 1-like (LOC108994763), transcript variant X2, mRNA NA coding protein psRNATarget
XM_018970087.1
ncRNA:24   GUUUGACUGCAUCAAAGUACACUA   1
  ||||||||||*||*||||||||||
targets:2683   CAAACUGACGCAGCUUCAUGUGAU   2706

2.5 PREDICTED: Juglans regia GBF-interacting protein 1-like (LOC108994763), transcript variant X1, mRNA NA coding protein psRNATarget