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BaseInfo

ncRNA ID	novel_jre_miR827
Species	Juglans regia
Class	miRNA
Genome position	NW_017388734.1:52723-52880 [+]
Reference genome	wgs.5d
Source	SRR1170966
Length	24
Mature sequence(if miRNA)	1 - AGGAGAUGUGUGGUCUAGAUGAUG - 24
Stem-loop(if miRNA)	--                                                       UCAU   U  AAAAUGGAUGAAA   AGGAGAUGUGUGGUCUAGAUGAUGCCACAUCAUGUGUGUAAAAUGGAUGCUCCCA    GUG GC             U   |||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||| ||   UCCUCUACACACCAGAUCUACUACGGUGUAGUACACACGUUUUACCUACGAGGGU    CAC CG             A AC                                                       -UAC   -  AAGAUAGAUAUAA
Stem-loop sequence	AGGAGAUGUGUGGUCUAGAUGAUGCCACAUCAUGUGUGUAAAAUGGAUGCUCCCAUCAUGUGUGCAAAAUGGAUGAAAUAAAUAUAGAUAGAAGCCACCAUUGGGAGCAUCCAUUUUGCACACAUGAUGUGGCAUCAUCUAGACCACACAUCUCCUCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018994075.1	ncRNA:24   GUAGUAGAUCUGGUGUGUAGAGGA   1   |||||||||||||||||||||||* targets:2334   CAUCAUCUAGACCACACAUCUCCC   2357 Target Full Sequence	1.0	PREDICTED: Juglans regia mitogen-activated protein kinase kinase kinase 1-like (LOC109012440), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018994073.1	ncRNA:24   GUAGUAGAUCUGGUGUGUAGAGGA   1   |||||||||||||||||||||||* targets:2472   CAUCAUCUAGACCACACAUCUCCC   2495 Target Full Sequence	1.0	PREDICTED: Juglans regia mitogen-activated protein kinase kinase kinase 1-like (LOC109012440), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018994072.1	ncRNA:24   GUAGUAGAUCUGGUGUGUAGAGGA   1   |||||||||||||||||||||||* targets:2474   CAUCAUCUAGACCACACAUCUCCC   2497 Target Full Sequence	1.0	PREDICTED: Juglans regia mitogen-activated protein kinase kinase kinase 1-like (LOC109012440), transcript variant X1, mRNA	NA	coding protein	psRNATarget