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BaseInfo

ncRNA ID	novel_jre_miR821
Species	Juglans regia
Class	miRNA
Genome position	NW_017389026.1:8304-8430 [-]
Reference genome	wgs.5d
Source	SRR1170966
Length	24
Mature sequence(if miRNA)	104 - AAUAGACAAGUCUCAUACAAGCCU - 127
Stem-loop(if miRNA)	--           C         -CC         A   AGACCGCAC   AAAAAAGUAUAAAAA   AAUAGACAAGU UCAUACAAG   UUUGUAAAA AAU         CUU               A   ||||||||||| |||||||||   ||||||||| |||         |||   UUAUUUGUUCA AGUAUGUUU   AAAUAUUUU UUA         AAU               A AU           A         AAA         A   ----ACCAG   AAUUAUUUAUUAUUA
Stem-loop sequence	AAUAGACAAGUCUCAUACAAGCCUUUGUAAAAAAAUAGACCGCACCUUAAAAAAGUAUAAAAAAAAUUAUUAUUUAUUAAUAAGACCAAUUAUUUUAUAAAAAAUUUGUAUGAAACUUGUUUAUUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018950717.1	ncRNA:24   UCCGAACAUACUCUGAACAGAUAA   1   =||||||*|||||||||||||||| targets:1430   GGGCUUGCAUGAGACUUGUCUAUU   1453 Target Full Sequence	1.0	PREDICTED: Juglans regia aminotransferase ALD1-like (LOC108979924), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018950714.1	ncRNA:24   UCCGAACAUACUCUGAACAGAUAA   1   =||||||*|||||||||||||||| targets:1918   GGGCUUGCAUGAGACUUGUCUAUU   1941 Target Full Sequence	1.0	PREDICTED: Juglans regia aminotransferase ALD1-like (LOC108979924), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018950716.1	ncRNA:24   UCCGAACAUACUCUGAACAGAUAA   1   =||||||*|||||||||||||||| targets:2036   GGGCUUGCAUGAGACUUGUCUAUU   2059 Target Full Sequence	1.0	PREDICTED: Juglans regia aminotransferase ALD1-like (LOC108979924), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018971339.1	ncRNA:24   UCCGAACAUACUCUGAACAGAUAA   1   |*||||||||||*||||||||||| targets:1047   AAGCUUGUAUGAAACUUGUCUAUU   1070 Target Full Sequence	1.5	PREDICTED: Juglans regia uncharacterized LOC108995726 (LOC108995726), mRNA	NA	coding protein	psRNATarget