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BaseInfo

ncRNA ID novel_jre_miR820
Species Juglans regia
Class miRNA
Genome position NW_017388997.1:294302-294491 [+]
Reference genome wgs.5d
Source SRR1170966
Length 24
Mature sequence(if miRNA) 167 - ACUAGAAGCCUGUAUGAAUUUAUU - 190
Stem-loop(if miRNA) --            A     C       C     UCA   AUA      G  C        -     A      UG UG     --U  --   GU  A
  UAAGUUUAUAUA GCUUC AGUCUUG AGAGA   AAC   GAGAAU AU UUGAAAAA UGUGA GACUUU  U  UUACU   CA  CUU  CG G
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  AUUUAAGUAUGU CGAAG UCAGAAC UCUCU   UUG   CUCUUA UA AACUUUUU AUACU CUGAAA  A  AAUGA   GU  GAG  GC G
UU            C     A       A     UAC   --C      G  A        U     -      GU GU     CAU  AA   AG  U
Stem-loop sequence UAAGUUUAUAUAAGCUUCCAGUCUUGCAGAGAUCAAACAUAGAGAAUGAUCUUGAAAAAUGUGAAGACUUUUGUUGUUACUUCACUUGUCGAGGUCGGAGAGAAUGUACAGUAAUGAUGAAAGUCUCAUAUUUUUUCAAAAUGAUUCUCCGUUCAUUCUCUACAAGACUAGAAGCCUGUAUGAAUUUAUU