ncRNA ID | novel_jre_miR820 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017388997.1:294302-294491 [+] |
Reference genome | wgs.5d |
Source | SRR1170966 |
Length | 24 |
Mature sequence(if miRNA) | 167 - ACUAGAAGCCUGUAUGAAUUUAUU - 190 |
Stem-loop(if miRNA) |
--            A     C       C     UCA   AUA      G  C        -     A      UG UG     --U  --   GU  A   UAAGUUUAUAUA GCUUC AGUCUUG AGAGA   AAC   GAGAAU AU UUGAAAAA UGUGA GACUUU  U  UUACU   CA  CUU  CG G   |||||||||||| ||||| ||||||| |||||   |||   |||||| || |||||||| ||||| ||||||  |  |||||   ||  |||  ||   AUUUAAGUAUGU CGAAG UCAGAAC UCUCU   UUG   CUCUUA UA AACUUUUU AUACU CUGAAA  A  AAUGA   GU  GAG  GC G UU            C     A       A     UAC   --C      G  A        U     -      GU GU     CAU  AA   AG  U |
Stem-loop sequence | UAAGUUUAUAUAAGCUUCCAGUCUUGCAGAGAUCAAACAUAGAGAAUGAUCUUGAAAAAUGUGAAGACUUUUGUUGUUACUUCACUUGUCGAGGUCGGAGAGAAUGUACAGUAAUGAUGAAAGUCUCAUAUUUUUUCAAAAUGAUUCUCCGUUCAUUCUCUACAAGACUAGAAGCCUGUAUGAAUUUAUU |