ncRNA ID | novel_jre_miR817 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017388976.1:411542-411671 [+] |
Reference genome | wgs.5d |
Source | SRR1170966 |
Length | 24 |
Mature sequence(if miRNA) | 107 - AUAUUGGUUCUGUUCAAGUUUCUG - 130 |
Stem-loop(if miRNA) |
--A     GU      -    --    CUAUAUCCAAAACCCA      AUG    -UUGU     -C       CA    AAACU  UGAACA AACU  UAUG                UGAAAA   UUGU     UUAAU  GAAAAUC  U    |||||  |||||| ||||  ||||                ||||||   ||||     |||||  |||||||  U    UUUGA  ACUUGU UUGG  AUAC                ACUUUU   AACA     AAUUA  CUUUUAG  C GUC     --      C    UU    ----------------      --A    UUGUU     AU       UA |
Stem-loop sequence | AAAACUGUUGAACAAACUUAUGCUAUAUCCAAAACCCAUGAAAAAUGUUGUUUGUUUAAUCGAAAAUCCAUUCAUGAUUUUCUAAUUAAUUGUUACAAAUUUUCACAUAUUGGUUCUGUUCAAGUUUCUG |