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BaseInfo

ncRNA ID novel_jre_miR817
Species Juglans regia
Class miRNA
Genome position NW_017388976.1:411542-411671 [+]
Reference genome wgs.5d
Source SRR1170966
Length 24
Mature sequence(if miRNA) 107 - AUAUUGGUUCUGUUCAAGUUUCUG - 130
Stem-loop(if miRNA) --A     GU      -    --    CUAUAUCCAAAACCCA      AUG    -UUGU     -C       CA
   AAACU  UGAACA AACU  UAUG                UGAAAA   UUGU     UUAAU  GAAAAUC  U
   |||||  |||||| ||||  ||||                ||||||   ||||     |||||  |||||||  U
   UUUGA  ACUUGU UUGG  AUAC                ACUUUU   AACA     AAUUA  CUUUUAG  C
GUC     --      C    UU    ----------------      --A    UUGUU     AU       UA
Stem-loop sequence AAAACUGUUGAACAAACUUAUGCUAUAUCCAAAACCCAUGAAAAAUGUUGUUUGUUUAAUCGAAAAUCCAUUCAUGAUUUUCUAAUUAAUUGUUACAAAUUUUCACAUAUUGGUUCUGUUCAAGUUUCUG