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BaseInfo

ncRNA ID novel_jre_miR815
Species Juglans regia
Class miRNA
Genome position NW_017388955.1:551951-552010 [-]
Reference genome wgs.5d
Source SRR1170966
Length 24
Mature sequence(if miRNA) 1 - AAAUUACUGUUGAUUUGUUGAGCC - 24
Stem-loop(if miRNA) --         U UG  U        -   U
  CUCAACAAA U  GC AGUGAUUU AAU U
  ||||||||| |  || |||||||| ||| G
  GAGUUGUUU A  UG UCAUUAAA UUG A
CC         - GU  -        A   A
Stem-loop sequence CUCAACAAAUUUGGCUAGUGAUUUAAUUUGAAGUUAAAAUUACUGUUGAUUUGUUGAGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018997278.1
ncRNA:24   CCGAGUUGUUUAGUUGUCAUUAAA   1
  ||=*===||||||||||||||||*
targets:1454   GGUGUGGCAAAUCAACAGUAAUUG   1477

3.0 PREDICTED: Juglans regia putative ABC transporter B family member 8 (LOC109014778), partial mRNA NA coding protein psRNATarget
XM_018997703.1
ncRNA:24   CCGAGUUGUUUAGUUGUCAUUAAA   1
  ||=*===||||||||||||||||*
targets:2169   GGUGUGGCAAAUCAACAGUAAUUG   2192

3.0 PREDICTED: Juglans regia putative ABC transporter B family member 8 (LOC109015224), mRNA NA coding protein psRNATarget