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BaseInfo

ncRNA ID novel_jre_miR806
Species Juglans regia
Class miRNA
Genome position NW_017443609.1:774426-774507 [-]
Reference genome wgs.5d
Source SRR1170965
Length 24
Mature sequence(if miRNA) 59 - AUUUCGGAUUAAAUGAGUUGACCU - 82
Stem-loop(if miRNA) -AU     A     -UG         U   UU   -     U
   UUCGG UUAAA   AGUUGACCU UUA  GAC CAGUU A
   ||||| |||||   ||||||||| |||  ||| |||||
   AAGCC AGUUU   UUAACUGGG AAU  UUG GUUAA U
CCU     C     UGA         C   -U   U     A
Stem-loop sequence AUUUCGGAUUAAAUGAGUUGACCUUUUAUUGACCAGUUUAUAAAUUGUGUUUUAACGGGUCAAUUAGUUUUGACCCGAAUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018964340.1
ncRNA:24   UCC-AGUUGAGUAAAUUAGGCUUUA   1
  |||-|||||*||*||||||||||||
targets:2656   AGGCUCAACCCACUUAAUCCGAAAU   2680

2.5 PREDICTED: Juglans regia putative receptor protein kinase ZmPK1 (LOC108990392), mRNA NA coding protein psRNATarget