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BaseInfo

ncRNA ID novel_jre_miR804
Species Juglans regia
Class miRNA
Genome position NW_017443609.1:1181831-1181909 [+]
Reference genome wgs.5d
Source SRR1170965;SRR1170966
Length 21
Mature sequence(if miRNA) 59 - UUGAUGGUCAGAACAGAUGUA - 79
Stem-loop(if miRNA) --          A               A          
  CAUCUGUUCU ACCAUCAACAUAGUU UUUUUUUUUAU
  |||||||||| ||||||||||||||| ||||||||||A
  GUAGACAAGA UGGUAGUUGUAUCAA AAAAAAAAAUU
AU          C               C          
Stem-loop sequence CAUCUGUUCUAACCAUCAACAUAGUUAUUUUUUUUUAUAUUAAAAAAAAACAACUAUGUUGAUGGUCAGAACAGAUGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018994782.1
ncRNA:21   AUGUAGACAAGACUGGUAGUU   1
  *||||||**||||||||||||
targets:156   GACAUCUUGUCUGACCAUCAA   176

2.5 PREDICTED: Juglans regia 40S ribosomal protein S12-like (LOC109012893), mRNA NA coding protein psRNATarget