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BaseInfo

ncRNA ID novel_jre_miR801
Species Juglans regia
Class miRNA
Genome position NW_017443604.1:306606-306751 [-]
Reference genome wgs.5d
Source SRR1170965;SRR1170966;SRR1168884;SRR1168886
Length 25
Mature sequence(if miRNA) 122 - UCUUUCCUUGGACCCGAAAGCUUCC - 146
Stem-loop(if miRNA) --      C       CGA            C    CACUAAAUUU     C C        CCUU    U    UAA
  UCUUUC UUGGACC   AAGCUUCCUAAG AAGU          CUUCU U UCUUUUCU    UUGU GCCU   C
  |||||| |||||||   |||||||||||| ||||          ||||| | ||||||||    |||| ||||
  AGGAAG AACCUGG   UUCGAAGGAUUC UUCG          GAAGA A AGAAAAGA    AACG UGGG   C
GA      U       -AA            C    ----AUAACU     A A        ----    -    UAG
Stem-loop sequence UCUUUCCUUGGACCCGAAAGCUUCCUAAGCAAGUCACUAAAUUUCUUCUCUCUCUUUUCUCCUUUUGUUGCCUUAACCGAUGGGUGCAAAGAAAAGAAAAAGAAGUCAAUAGCUUCCUUAGGAAGCUUAAGGUCCAAUGAAGGAAG