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BaseInfo

ncRNA ID	novel_jre_miR799
Species	Juglans regia
Class	miRNA
Genome position	NW_017443594.1:182391-182500 [+]
Reference genome	wgs.5d
Source	SRR1170965
Length	24
Mature sequence(if miRNA)	87 - UUUCAAAAUGAUUGCACGACGUUU - 110
Stem-loop(if miRNA)	--GUA               U      A     UU AUUAUUAAAAAAAUAUUAUU      UCGUGUAAUCGUUUU AAAAAA UGAGA  U                    U      ||||||||||||||| |||||| |||||  |      AGCACGUUAGUAAAA UUUUUU CACUU  A                    U UUUGC               C      U     -- UUUAUGCCCUAAGUGUACUU
Stem-loop sequence	GUAUCGUGUAAUCGUUUUUAAAAAAAUGAGAUUUAUUAUUAAAAAAAUAUUAUUUUUUCAUGUGAAUCCCGUAUUUAUUCACUUUUUUUCAAAAUGAUUGCACGACGUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018989745.1	ncRNA:24   UUUGCAGCACGUUAGUAAAACUUU   1   ||==|||*|||||||||||||||| targets:1394   AAGUGUCAUGCAAUCAUUUUGAAA   1417 Target Full Sequence	1.0	PREDICTED: Juglans regia probable uridine nucleosidase 2 (LOC109009305), mRNA	NA	coding protein	psRNATarget
XM_018994005.1	ncRNA:24   UUUGCAGCACGUUAGUAAAACUUU   1   ||||*|||*|=||||||||||||| targets:1004   AAACAUCGCGUAAUCAUUUUGAAA   1027 Target Full Sequence	2.0	PREDICTED: Juglans regia dnAJ-like protein slr0093 (LOC109012397), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018994004.1	ncRNA:24   UUUGCAGCACGUUAGUAAAACUUU   1   ||||*|||*|=||||||||||||| targets:1326   AAACAUCGCGUAAUCAUUUUGAAA   1349 Target Full Sequence	2.0	PREDICTED: Juglans regia dnAJ-like protein slr0093 (LOC109012397), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018969255.1	ncRNA:24   UUUGCAGCACGUUAGUAAAACUUU   1   *|=||*||||||=||||||||||| targets:1914   CAGCGCCGUGCAGUCAUUUUGAAA   1937 Target Full Sequence	2.5	PREDICTED: Juglans regia CTP synthase-like (LOC108994151), transcript variant X1, mRNA	NA	coding protein	psRNATarget