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BaseInfo

ncRNA ID	novel_jre_miR798
Species	Juglans regia
Class	miRNA
Genome position	NW_017443592.1:921507-921623 [+]
Reference genome	wgs.5d
Source	SRR1170965
Length	24
Mature sequence(if miRNA)	94 - UAAAAUGACUGCACGACACUUGCA - 117
Stem-loop(if miRNA)	--          A                  -UAA   A      GACCUAUAU     GAA   UAGGUGUCGU CAGUCAUUUUAAAAAAAG    AUA AUAUUA         AAAAA   A   |||||||||| ||||||||||||||||||    ||| ||||||         |||||   GUUCACAGCA GUCAGUAAAAUUUUUUUU    UAU UAUGAU         UUUUU   U AC          C                  UUAC   A      ------AAU     AAU
Stem-loop sequence	UAGGUGUCGUACAGUCAUUUUAAAAAAAGUAAAUAAAUAUUAGACCUAUAUAAAAAGAAAUUAAUUUUUUAAUAGUAUAUAUCAUUUUUUUUUUAAAAUGACUGCACGACACUUGCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018996804.1	ncRNA:24   ACGUUCACAGCACGUCAGUAAAAU   1   ||||=*||||*||||||||||||* targets:1219   UGCAGAUGUCUUGCAGUCAUUUUU   1242 Target Full Sequence	3.0	PREDICTED: Juglans regia protein root UVB sensitive 3 (LOC109014367), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018996803.1	ncRNA:24   ACGUUCACAGCACGUCAGUAAAAU   1   ||||=*||||*||||||||||||* targets:1219   UGCAGAUGUCUUGCAGUCAUUUUU   1242 Target Full Sequence	3.0	PREDICTED: Juglans regia protein root UVB sensitive 3 (LOC109014367), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018969255.1	ncRNA:24   ACGU--UCACAGCACGUCAGUAAAAU   1   |||=--||*|*||||||||||||||= targets:1909   UGCGCCAGCGCCGUGCAGUCAUUUUG   1934 Target Full Sequence	3.0	PREDICTED: Juglans regia CTP synthase-like (LOC108994151), transcript variant X1, mRNA	NA	coding protein	psRNATarget