ncRNA ID | novel_jre_miR796 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017388898.1:2295094-2295227 [-] |
Reference genome | wgs.5d |
Source | SRR1170965 |
Length | 24 |
Mature sequence(if miRNA) | 111 - AUCCCACAAAAUAAACCCAUAACC - 134 |
Stem-loop(if miRNA) |
--           -           CC        C  G    A C          GUAAAAC      UA   AUCCCACAAAA UAAACCCAUAA  UGGCGUGG UU AUGU G AUGUUAGAUU       UGCUUU  U   ||||||||||| |||||||||||  |||||||| || |||| | ||||||||||       ||||||   UAGGGUGUUUU AUUUGGGUGUU  ACUGUAUC AA UAUA U UGCAAUCUAA       AUGAAA  U UU           C           UA        A  G    C A          -------      UG |
Stem-loop sequence | AUCCCACAAAAUAAACCCAUAACCUGGCGUGGCUUGAUGUAGCAUGUUAGAUUGUAAAACUGCUUUUAUUGUAAAGUAAAUCUAACGUAUCAUAUGAAACUAUGUCAAUUUGUGGGUUUACUUUUGUGGGAUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018966026.1 |
|
1.5 | PREDICTED: Juglans regia probable LRR receptor-like serine/threonine-protein kinase At2g16250 (LOC108991690), mRNA | NA | coding protein | psRNATarget |