ncRNA ID | novel_jre_miR792 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017443548.1:118103-118245 [-] |
Reference genome | wgs.5d |
Source | SRR1170965 |
Length | 24 |
Mature sequence(if miRNA) | 120 - AAGCUUCACACUCUGCACACCACU - 143 |
Stem-loop(if miRNA) |
-      C   C   -               AA       U    C              A       UUUC  AAGCUU ACA UCU GCACACCACUUAAAA  UAUGUGA UUUA UUUUUUAUUUUCAU UUUUAUA    A  |||||| ||| ||| |||||||||||||||  ||||||| |||| |||||||||||||| |||||||  UUUGGA UGU AGA UGUGUGGUGAAUUUU  AUACAUU AAAU AGAAAAUGGGAGUA AAAGUAU    U A      A   A   A               -G       U    A              C       UUUA |
Stem-loop sequence | AAGCUUCACACUCUGCACACCACUUAAAAAAUAUGUGAUUUUACUUUUUUAUUUUCAUAUUUUAUAUUUCAUAUUUUAUGAAACAUGAGGGUAAAAGAAUAAAUUUACAUAGUUUUAAGUGGUGUGUAAGAAUGUAAGGUUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018983270.1 |
|
1.0 | PREDICTED: Juglans regia leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 (LOC109004640), mRNA | NA | coding protein | psRNATarget |