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BaseInfo

ncRNA ID	novel_jre_miR779
Species	Juglans regia
Class	miRNA
Genome position	NW_017442783.1:140148-140260 [-]
Reference genome	wgs.5d
Source	SRR1170965;SRR1170966
Length	22
Mature sequence(if miRNA)	92 - CAGCCAAGGAUGACUUGCCGGC - 113
Stem-loop(if miRNA)	--C     AG             CAAAAC   -   AU    -CA      A       U    AGCCA  GAUGACUUGCCGG      GUA CUU  CCAU   UAGUAU UAUGUAU U    |||||  |||||||||||||      ||| |||  ||||   |||||| ||||||| A    UCGGU  CUACUGAACGGCC      UAU GAG  GGUA   GUCGUA AUACGUA C GUA     CU             ------   C   CU    CUA      C       C
Stem-loop sequence	CAGCCAAGGAUGACUUGCCGGCAAAACGUACUUAUCCAUCAUAGUAUAUAUGUAUUUACCAUGCAUACAUGCUGAUCAUGGUCGAGCUAUCCGGCAAGUCAUCUCUGGCUAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018957961.1	ncRNA:22   CGGCCGUUCAGUAGGAACCGAC   1   *|=|||||*||||||||||||* targets:1484   UCUGGCAAUUCAUCCUUGGCUU   1505 Target Full Sequence	2.0	PREDICTED: Juglans regia nuclear transcription factor Y subunit A-3-like (LOC108985605), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018957962.1	ncRNA:22   CGGCCGUUCAGUAGGAACCGAC   1   *|=|||||*||||||||||||* targets:1599   UCUGGCAAUUCAUCCUUGGCUU   1620 Target Full Sequence	2.0	PREDICTED: Juglans regia nuclear transcription factor Y subunit A-3-like (LOC108985605), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018989867.1	ncRNA:22   CGGCCGUUCAGUAGGAACCGAC   1   *==|||||*||||||||||||* targets:1765   CUUGGCAAUUCAUCCUUGGCUU   1786 Target Full Sequence	2.0	PREDICTED: Juglans regia nuclear transcription factor Y subunit A-3-like (LOC109009408), mRNA	NA	coding protein	psRNATarget
XM_018995632.1	ncRNA:22   CGGCCGUUCAGUAGGAACCGAC   1   **=|||||*||||||||||||* targets:1636   CAUGGCAACUCAUCCUUGGCUC   1657 Target Full Sequence	2.0	PREDICTED: Juglans regia nuclear transcription factor Y subunit A-10-like (LOC109013516), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018995631.1	ncRNA:22   CGGCCGUUCAGUAGGAACCGAC   1   **=|||||*||||||||||||* targets:1639   CAUGGCAACUCAUCCUUGGCUC   1660 Target Full Sequence	2.0	PREDICTED: Juglans regia nuclear transcription factor Y subunit A-10-like (LOC109013516), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018979555.1	ncRNA:22   CGGCCGUUCAGUAGGAACCGAC   1   |**||*|||||||||||||||* targets:1298   GAAGGGAAGUCAUCCUUGGCUC   1319 Target Full Sequence	2.0	PREDICTED: Juglans regia nuclear transcription factor Y subunit A-3-like (LOC109002002), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018979556.1	ncRNA:22   CGGCCGUUCAGUAGGAACCGAC   1   |**||*|||||||||||||||* targets:1308   GAAGGGAAGUCAUCCUUGGCUC   1329 Target Full Sequence	2.0	PREDICTED: Juglans regia nuclear transcription factor Y subunit A-3-like (LOC109002002), transcript variant X2, mRNA	NA	coding protein	psRNATarget