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BaseInfo

ncRNA ID novel_jre_miR768
Species Juglans regia
Class miRNA
Genome position NW_017439830.1:48691-48754 [-]
Reference genome wgs.5d
Source SRR1170965;SRR1168884
Length 24
Mature sequence(if miRNA) 1 - AUGAUGUGAAGUGUGUGCCGGUGU - 24
Stem-loop(if miRNA) --             -  ACC    GAGUGUA
  AUCGGCACACACU CA   UAUU       A
  ||||||||||||| ||   ||||       A
  UGGCCGUGUGUGA GU   GUAA       A
UG             A  GUA    AAAAAAA
Stem-loop sequence AUCGGCACACACUCAACCUAUUGAGUGUAAAAAAAAAAAAAUGAUGUGAAGUGUGUGCCGGUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018997047.1
ncRNA:24   UGUGGCCGUGUGUGAAGUGUAGUA   1
  |||||||||||||||||||||||*
targets:1158   ACACCGGCACACACUUCACAUCAC   1181

1.0 PREDICTED: Juglans regia uncharacterized LOC109014545 (LOC109014545), transcript variant X2, mRNA NA coding protein psRNATarget
XM_018997046.1
ncRNA:24   UGUGGCCGUGUGUGAAGUGUAGUA   1
  |||||||||||||||||||||||*
targets:1158   ACACCGGCACACACUUCACAUCAC   1181

1.0 PREDICTED: Juglans regia uncharacterized LOC109014545 (LOC109014545), transcript variant X1, mRNA NA coding protein psRNATarget
XM_018973992.1
ncRNA:24   UGUGGCCGUGUGUGAAGUGUAGUA   1
  ||||=*|||||||||||||||=||
targets:195   ACACUAGCACACACUUCACAUUAU   218

2.5 PREDICTED: Juglans regia LRR receptor-like serine/threonine-protein kinase HSL2 (LOC108997635), mRNA NA coding protein psRNATarget