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BaseInfo

ncRNA ID	novel_jre_miR762
Species	Juglans regia
Class	miRNA
Genome position	NW_017437329.1:3079-3236 [-]
Reference genome	wgs.5d
Source	SRR1170965;SRR1170970
Length	24
Mature sequence(if miRNA)	1 - GUUUUCUUGUAGUGUCAUGAGCCU - 24
Stem-loop(if miRNA)	--C  A  C              ACAGG       AAC  ---A      G GAC        A     G GAUG     AG    CU GU AUACUACAAGAAAA     UAUUUGU   GG    UUAUUU U   GAGAAUGA UAUUU C    AAAAU  A    || || ||||||||||||||     |||||||   ||    |||||| |   |||||||| ||||| |    |||||    GA UA UGUGAUGUUCUUUU     AUAAACA   CC    AAUAAA G   UUUUUACU AUAAG G    UUUUA  C UCC  G  C              GACGA       ---  GAUC      G ACA        G     G AUAA     CU
Stem-loop sequence	CCUAGUCAUACUACAAGAAAAACAGGUAUUUGUAACGGAUUAUUUGUGACGAGAAUGAAUAUUUGCGAUGAAAAUAGACUCAUUUUAAUAGGGAAUAGUCAUUUUUACAGGAAAUAACUAGCCACAAAUAAGCAGUUUUCUUGUAGUGUCAUGAGCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018957977.1	ncRNA:24   UCC---GAGUACUGUGAUGUUCUUUUG   1   =||---|||*|*||||||||||||||* targets:3597   GGGACACUCCUAACACUACAAGAAAAA   3623 Target Full Sequence	3.0	PREDICTED: Juglans regia probable LRR receptor-like serine/threonine-protein kinase At3g47570 (LOC108985618), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018957978.1	ncRNA:24   UCC---GAGUACUGUGAUGUUCUUUUG   1   =||---|||*|*||||||||||||||* targets:3597   GGGACACUCCUAACACUACAAGAAAAA   3623 Target Full Sequence	3.0	PREDICTED: Juglans regia probable LRR receptor-like serine/threonine-protein kinase At3g47570 (LOC108985618), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_018957975.1	ncRNA:24   UCC---GAGUACUGUGAUGUUCUUUUG   1   =||---|||*|*||||||||||||||* targets:3597   GGGACACUCCUAACACUACAAGAAAAA   3623 Target Full Sequence	3.0	PREDICTED: Juglans regia probable LRR receptor-like serine/threonine-protein kinase At3g47570 (LOC108985618), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018957976.1	ncRNA:24   UCC---GAGUACUGUGAUGUUCUUUUG   1   =||---|||*|*||||||||||||||* targets:3597   GGGACACUCCUAACACUACAAGAAAAA   3623 Target Full Sequence	3.0	PREDICTED: Juglans regia probable LRR receptor-like serine/threonine-protein kinase At3g47570 (LOC108985618), transcript variant X2, mRNA	NA	coding protein	psRNATarget