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BaseInfo

ncRNA ID	novel_jre_miR758
Species	Juglans regia
Class	miRNA
Genome position	NW_017436793.1:24166-24275 [-]
Reference genome	wgs.5d
Source	SRR1170965
Length	24
Mature sequence(if miRNA)	1 - UUUCAAAGCGACUGCACGGCACUU - 24
Stem-loop(if miRNA)	--GC          UA             ---------     -     UAU       UA     GCCGUGCAGU  UUUUGAAAAAGAG         AUGGG UCUAC   UAAAAAU  A     ||||||||||  |||||||||||||         ||||| |||||   |||||||     CGGCACGUCA  GAAACUUUUUUUC         UGCCC GGGUG   AUUUUUA  U UUCA          GC             AUUUAUUUA     U     --U       UU
Stem-loop sequence	GCGCCGUGCAGUUAUUUUGAAAAAGAGAUGGGUCUACUAUUAAAAAUUAAUUUAUUUUUAUGUGGGUCCCGUAUUUAUUUACUUUUUUUCAAAGCGACUGCACGGCACUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018980788.1	ncRNA:24   UUCACGGCACGUCAGCGAAACUUU   1   |||*|||||||||||||||||||| targets:1608   AAGCGCCGUGCAGUCGCUUUGAAA   1631 Target Full Sequence	0.0	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC109002870), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_018994468.1	ncRNA:24   UUCACGGCACGUCAGCGAAACUUU   1   ||||*||||||||||*|||||||| targets:1452   AAGUACCGUGCAGUCACUUUGAAA   1475 Target Full Sequence	1.5	PREDICTED: Juglans regia serine/threonine-protein phosphatase PP1-like (LOC109012694), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_019004598.1	ncRNA:24   UUCACGGCACGUCAGCGAAACUUU   1   |||*|=|*|||||||||||||||| targets:1272   AAGCGUCAUGCAGUCGCUUUGAAA   1295 Target Full Sequence	2.0	PREDICTED: Juglans regia branched-chain-amino-acid aminotransferase 2, chloroplastic-like (LOC109021870), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019004597.1	ncRNA:24   UUCACGGCACGUCAGCGAAACUUU   1   |||*|=|*|||||||||||||||| targets:1391   AAGCGUCAUGCAGUCGCUUUGAAA   1414 Target Full Sequence	2.0	PREDICTED: Juglans regia branched-chain-amino-acid aminotransferase 2, chloroplastic-like (LOC109021870), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018952930.1	ncRNA:24   UUCACGGCACGUCAGCGAAACUUU   1   |||*|||*|||||||*|||||||| targets:3183   AAGCGCCUUGCAGUCACUUUGAAA   3206 Target Full Sequence	2.5	PREDICTED: Juglans regia pullulanase 1, chloroplastic (LOC108981688), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018952929.1	ncRNA:24   UUCACGGCACGUCAGCGAAACUUU   1   |||*|||*|||||||*|||||||| targets:3186   AAGCGCCUUGCAGUCACUUUGAAA   3209 Target Full Sequence	2.5	PREDICTED: Juglans regia pullulanase 1, chloroplastic (LOC108981688), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018992483.1	ncRNA:24   UUCACGGCACGUCAGCGAAACUUU   1   |||*|=|*||=||||||||||||| targets:2411   AAGCGUCUUGUAGUCGCUUUGAAA   2434 Target Full Sequence	3.0	PREDICTED: Juglans regia elongation factor G-2, chloroplastic (LOC109011319), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018983089.1	ncRNA:24   UUCACGGCACGUCAGCGAAACUUU   1   ||*|||**||=||||||||||||| targets:302   AAAUGCGAUGUAGUCGCUUUGAAA   325 Target Full Sequence	3.0	PREDICTED: Juglans regia putative transporter arsB (LOC109004518), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_018983090.1	ncRNA:24   UUCACGGCACGUCAGCGAAACUUU   1   ||*|||**||=||||||||||||| targets:302   AAAUGCGAUGUAGUCGCUUUGAAA   325 Target Full Sequence	3.0	PREDICTED: Juglans regia putative transporter arsB (LOC109004518), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_018983086.1	ncRNA:24   UUCACGGCACGUCAGCGAAACUUU   1   ||*|||**||=||||||||||||| targets:302   AAAUGCGAUGUAGUCGCUUUGAAA   325 Target Full Sequence	3.0	PREDICTED: Juglans regia putative transporter arsB (LOC109004518), transcript variant X1, mRNA	NA	coding protein	psRNATarget