ncRNA ID | novel_jre_miR750 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017429618.1:624-786 [+] |
Reference genome | wgs.5d |
Source | SRR1170965 |
Length | 24 |
Mature sequence(if miRNA) | 140 - CAUUCCACGAUUGUAUGUAGCAUU - 163 |
Stem-loop(if miRNA) |
--  A   U          -  C      U  C                    -   AAAUAAAUAA   AC    -CUG      AA   UG UAC UGCAGUCGUG AG GUGCAG CG CGUGCAGUCGCUUUGAAAAA AGU          GGG  CCAC    AAAAGA  U   || ||| |||||||||| || |||||| || |||||||||||||||||||| |||          |||  ||||    ||||||   AC AUG AUGUUAGCAC UU CGCGUU GC GCACGUCAGCGAAACUUUUU UCA          CCC  GGUG    UUUUUU  U UU  G   U          C  A      U  A                    C   ----------   CA    AUAA      AA |
Stem-loop sequence | UGAUACUUGCAGUCGUGAGCGUGCAGUCGCCGUGCAGUCGCUUUGAAAAAAGUAAAUAAAUAAGGGACCCACCUGAAAAGAAAUUAAUUUUUUAAUAGUGGACCCCACUCUUUUUCAAAGCGACUGCACGACGUUUGCGCAUUCCACGAUUGUAUGUAGCAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018970092.1 |
|
2.5 | PREDICTED: Juglans regia translation initiation factor eIF-2B subunit epsilon (LOC108994766), transcript variant X6, mRNA | NA | coding protein | psRNATarget |