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BaseInfo

ncRNA ID novel_jre_miR736
Species Juglans regia
Class miRNA
Genome position NW_017388861.1:1392556-1392663 [+]
Reference genome wgs.5d
Source SRR1170965
Length 23
Mature sequence(if miRNA) 86 - UUUCAAAACGAUUACGCGGUAGU - 108
Stem-loop(if miRNA) --                      AAAUAAAUAAAAUA    AC    -  GAA    A
  UACCGCGUAAUCGUUUUGAAAA              UGGG  CUAC AU   AAAA U
  ||||||||||||||||||||||              ||||  |||| ||   |||| U
  AUGGCGCAUUAGCAAAACUUUU              ACUC  GAUG UA   UUUU A
UG                      ----------ACUC    CA    A  AUG    A
Stem-loop sequence UACCGCGUAAUCGUUUUGAAAAAAAUAAAUAAAAUAUGGGACCUACAUGAAAAAAAUUAAUUUUGUAAUAGUAGACCUCACUCAUUUUCAAAACGAUUACGCGGUAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018987355.1
ncRNA:23   UGAUGGCGCAUUAGCAAAACUUU   1
  ||*=|||||||||||*|||||||
targets:1849   ACCGCCGCGUAAUCGCUUUGAAA   1871

1.5 PREDICTED: Juglans regia 7-deoxyloganetin glucosyltransferase-like (LOC109007610), mRNA NA coding protein psRNATarget
XM_018953401.1
ncRNA:23   UGAUGGCGCAUUAGCAAAACUUU   1
  ||*=|||||||||||*|||||||
targets:2312   ACCGCCGCGUAAUCGCUUUGAAA   2334

1.5 PREDICTED: Juglans regia receptor protein kinase CLAVATA1-like (LOC108982113), mRNA NA coding protein psRNATarget
XM_018998100.1
ncRNA:23   UGAUGGCGCAUUAGCAAAACUUU   1
  |||=|||=*||||||||||||||
targets:814   ACUGCCGUAUAAUCGUUUUGAAA   836

2.0 PREDICTED: Juglans regia pleiotropic drug resistance protein 1-like (LOC109015635), partial mRNA NA coding protein psRNATarget
XM_018994005.1
ncRNA:23   UGAUGGCGCAUUAGCAAAACUUU   1
  ||-|=|||||||||*||||||||
targets:1006   AC-AUCGCGUAAUCAUUUUGAAA   1027

2.5 PREDICTED: Juglans regia dnAJ-like protein slr0093 (LOC109012397), transcript variant X3, mRNA NA coding protein psRNATarget
XM_018994004.1
ncRNA:23   UGAUGGCGCAUUAGCAAAACUUU   1
  ||-|=|||||||||*||||||||
targets:1328   AC-AUCGCGUAAUCAUUUUGAAA   1349

2.5 PREDICTED: Juglans regia dnAJ-like protein slr0093 (LOC109012397), transcript variant X2, mRNA NA coding protein psRNATarget
XM_018987202.1
ncRNA:23   UGAUGGCGCAUUAGCAAAACUUU   1
  ==*||=|||||||||*|||||||
targets:1834   GUAACUGCGUAAUCGCUUUGAAA   1856

2.5 PREDICTED: Juglans regia NAC domain-containing protein 91-like (LOC109007516), mRNA NA coding protein psRNATarget
XM_018964513.1
ncRNA:23   UGAUGGCGCAUUAGCAAAACUUU   1
  |=*===||*||||||||||||||
targets:1881   AUGGUUGCCUAAUCGUUUUGAAA   1903

3.0 PREDICTED: Juglans regia lysosomal Pro-X carboxypeptidase (LOC108990515), mRNA NA coding protein psRNATarget