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BaseInfo

ncRNA ID novel_jre_miR733
Species Juglans regia
Class miRNA
Genome position NW_017391265.1:13130-13264 [+]
Reference genome wgs.5d
Source SRR1170965
Length 24
Mature sequence(if miRNA) 1 - AGGGACUUUGGAGAGGUGUAGAGA - 24
Stem-loop(if miRNA) --A   A   UG A    UG    GA     -----      GAAA   GCCU       UA       CA
   GGG CUU  G GAGG  UAGA  GCUUU     ACAUAU    CUU    GGAAUCU  UUAAGGG  A
   ||| |||  | ||||  ||||  |||||     ||||||    |||    |||||||  |||||||
   UCC GAG  C CUCC  AUUU  UGAAG     UGUAUA    GAG    CUUUAGG  GGUUUCU  C
ACA   -   GU -    CU    AC     GAAAU      AAUG   ACUU       UG       CU
Stem-loop sequence AGGGACUUUGGAGAGGUGUAGAGAGCUUUACAUAUGAAACUUGCCUGGAAUCUUAUUAAGGGCAACUCUCUUUGGGUGGAUUUCUUCAGAGGUAAAUAUGUUAAAGGAAGUCAUUUAUCCCUCCUGGAGCCUACA