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BaseInfo

ncRNA ID novel_jre_miR731
Species Juglans regia
Class miRNA
Genome position NW_017389827.1:3189-3323 [+]
Reference genome wgs.5d
Source SRR1170965
Length 24
Mature sequence(if miRNA) 1 - AGGGACUUUGGAGAGGUGUAGAGA - 24
Stem-loop(if miRNA) --A   A   UG A    UG    GA     -----      GAAA   GCCU       -UA U     C
   GGG CUU  G GAGG  UAGA  GCUUU     ACAUAU    CUU    GGAAUCU   U AAGGG A
   ||| |||  | ||||  ||||  |||||     ||||||    |||    |||||||   | ||||| A
   UCC GAG  C CUCC  AUUU  UGAAG     UGUAUA    GAA    CUUUAGG   G UUCUC C
ACA   -   GU -    CU    AC     AAAAU      AAUG   ACUU       UGG C     U
Stem-loop sequence AGGGACUUUGGAGAGGUGUAGAGAGCUUUACAUAUGAAACUUGCCUGGAAUCUUAUUAAGGGCAACUCUCUUCGGGUGGAUUUCUUCAAAGGUAAAUAUGUUAAAAGAAGUCAUUUAUCCCUCCUGGAGCCUACA