ncRNA ID | novel_jre_miR726 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017389484.1:123745-123871 [-] |
Reference genome | wgs.5d |
Source | SRR1170965;SRR1168884 |
Length | 20 |
Mature sequence(if miRNA) | 1 - AGGCAGUCUCCUUGGCUAAC - 20 |
Stem-loop(if miRNA) |
--          U    U     -CA   U        G      UUAAAAA   AGGGAGGGCCGUG   UAGCCAAGGA GACU GCCUG   GCC UACGAGGA CCUUAA       GGU             A   |||||||||| |||| |||||   ||| |||||||| ||||||       |||             U   AUCGGUUCCU CUGA CGGAC   UGG AUGUUCCU GGAAUU       UUG             C CA          -    -     AUA   U        A      -------   GGACAGUUUAUAC |
Stem-loop sequence | UAGCCAAGGAUGACUUGCCUGCAGCCUUACGAGGAGCCUUAAUUAAAAAGGUAGGGAGGGCCGUGAUCCAUAUUUGACAGGGUUUUAAGGAUCCUUGUAUGGUAUACAGGCAGUCUCCUUGGCUAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_019003092.1 |
|
3.0 | PREDICTED: Juglans regia probable inactive receptor kinase At5g10020 (LOC109020593), transcript variant X1, mRNA | NA | coding protein | psRNATarget |