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BaseInfo

ncRNA ID novel_jre_miR726
Species Juglans regia
Class miRNA
Genome position NW_017389484.1:123745-123871 [-]
Reference genome wgs.5d
Source SRR1170965;SRR1168884
Length 20
Mature sequence(if miRNA) 1 - AGGCAGUCUCCUUGGCUAAC - 20
Stem-loop(if miRNA) --          U    U     -CA   U        G      UUAAAAA   AGGGAGGGCCGUG
  UAGCCAAGGA GACU GCCUG   GCC UACGAGGA CCUUAA       GGU             A
  |||||||||| |||| |||||   ||| |||||||| ||||||       |||             U
  AUCGGUUCCU CUGA CGGAC   UGG AUGUUCCU GGAAUU       UUG             C
CA          -    -     AUA   U        A      -------   GGACAGUUUAUAC
Stem-loop sequence UAGCCAAGGAUGACUUGCCUGCAGCCUUACGAGGAGCCUUAAUUAAAAAGGUAGGGAGGGCCGUGAUCCAUAUUUGACAGGGUUUUAAGGAUCCUUGUAUGGUAUACAGGCAGUCUCCUUGGCUAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019003092.1
ncRNA:20   CAAUCGGUUCCUCUGACGGA   1
  *||*|==|||||||||||||
targets:3893   UUUUGUUAAGGAGACUGCCU   3912

3.0 PREDICTED: Juglans regia probable inactive receptor kinase At5g10020 (LOC109020593), transcript variant X1, mRNA NA coding protein psRNATarget