ncRNA ID | novel_jre_miR722 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017389329.1:363674-363817 [+] |
Reference genome | wgs.5d |
Source | SRR1170965 |
Length | 22 |
Mature sequence(if miRNA) | 123 - CGAUUACGCACUUCACGAUUGU - 144 |
Stem-loop(if miRNA) |
--AAC      A       C                       ---A   AAUAAAACAUGGGACUCACAUGA      CGUGAA UGCGUAA CGUCGCGUAAUCGCUUUGAAAAA    AUG                       A      |||||| ||||||| |||||||||||||||||||||||    |||                       A      GCACUU ACGCAUU GCGGUGCAUUAGCGAAACUUUUU    CCC                       A UGUUA      C       A                       CUCA   UAGGUGAUAAUUUUUUAAUUAAA |
Stem-loop sequence | AACCGUGAAAUGCGUAACCGUCGCGUAAUCGCUUUGAAAAAAAUGAAUAAAACAUGGGACUCACAUGAAAAAAAUUAAUUUUUUAAUAGUGGAUCCCACUCUUUUUCAAAGCGAUUACGUGGCGAUUACGCACUUCACGAUUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018953401.1 |
|
2.5 | PREDICTED: Juglans regia receptor protein kinase CLAVATA1-like (LOC108982113), mRNA | NA | coding protein | psRNATarget |