Search result

BaseInfo

ncRNA ID novel_jre_miR722
Species Juglans regia
Class miRNA
Genome position NW_017389329.1:363674-363817 [+]
Reference genome wgs.5d
Source SRR1170965
Length 22
Mature sequence(if miRNA) 123 - CGAUUACGCACUUCACGAUUGU - 144
Stem-loop(if miRNA) --AAC      A       C                       ---A   AAUAAAACAUGGGACUCACAUGA
     CGUGAA UGCGUAA CGUCGCGUAAUCGCUUUGAAAAA    AUG                       A
     |||||| ||||||| |||||||||||||||||||||||    |||                       A
     GCACUU ACGCAUU GCGGUGCAUUAGCGAAACUUUUU    CCC                       A
UGUUA      C       A                       CUCA   UAGGUGAUAAUUUUUUAAUUAAA
Stem-loop sequence AACCGUGAAAUGCGUAACCGUCGCGUAAUCGCUUUGAAAAAAAUGAAUAAAACAUGGGACUCACAUGAAAAAAAUUAAUUUUUUAAUAGUGGAUCCCACUCUUUUUCAAAGCGAUUACGUGGCGAUUACGCACUUCACGAUUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018953401.1
ncRNA:22   UGUUAGCACUUCACGCAUUAGC   1
  ||||*||||||||||||||*||
targets:2294   ACAACCGUGAAGUGCGUAACCG   2315

2.5 PREDICTED: Juglans regia receptor protein kinase CLAVATA1-like (LOC108982113), mRNA NA coding protein psRNATarget