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BaseInfo

ncRNA ID	novel_jre_miR721
Species	Juglans regia
Class	miRNA
Genome position	NW_017389283.1:358252-358358 [+]
Reference genome	wgs.5d
Source	SRR1170965
Length	24
Mature sequence(if miRNA)	84 - ACCGUGAAGUGCGUAAUCGCCGCG - 107
Stem-loop(if miRNA)	--  A          A    UA    CAAA   CUUUUCUUAUAUAUAUAUAUA   CG CGGUUACGCA UUCA  GUUG    UAU                     U   || |||||||||| ||||  ||||    |||   GC GCUAAUGCGU AAGU  CAAC    CAU                     A GC  C          G    GC    -AUA   CUUAAUGAGUGGCAUCUAUAU
Stem-loop sequence	CGACGGUUACGCAAUUCAUAGUUGCAAAUAUCUUUUCUUAUAUAUAUAUAUAUAUAUAUCUACGGUGAGUAAUUCUACAUACAACCGUGAAGUGCGUAAUCGCCGCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018951157.1	ncRNA:24   GCGCCGCUAAUGCGUGAAGUGCCA   1   =||||||=|||||||||||||||| targets:4426   UGCGGCGGUUACGCACUUCACGGU   4449 Target Full Sequence	1.0	PREDICTED: Juglans regia protein NLP9 (LOC108980290), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018951175.1	ncRNA:24   GCGCCGCUAAUGCGUGAAGUGCCA   1   =||||||=|||||||||||||||| targets:4416   UGCGGCGGUUACGCACUUCACGGU   4439 Target Full Sequence	1.0	PREDICTED: Juglans regia protein NLP9 (LOC108980290), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_018951165.1	ncRNA:24   GCGCCGCUAAUGCGUGAAGUGCCA   1   =||||||=|||||||||||||||| targets:4333   UGCGGCGGUUACGCACUUCACGGU   4356 Target Full Sequence	1.0	PREDICTED: Juglans regia protein NLP9 (LOC108980290), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018951169.1	ncRNA:24   GCGCCGCUAAUGCGUGAAGUGCCA   1   =||||||=|||||||||||||||| targets:4044   UGCGGCGGUUACGCACUUCACGGU   4067 Target Full Sequence	1.0	PREDICTED: Juglans regia protein NLP9 (LOC108980290), transcript variant X3, mRNA	NA	coding protein	psRNATarget