ncRNA ID | novel_jre_miR712 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017388947.1:1027717-1027865 [+] |
Reference genome | wgs.5d |
Source | SRR1170965 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AUGUCCCGACACUCUAAGUCU - 21 |
Stem-loop(if miRNA) |
--         CA        C C        C       AAA    A    A     -CAU  - UA     GA   AUGUCCCGA  CUCUAAGU U UGUUCCAU CCAAGCG   AUUG GGGC UCACA    GC U  CAGGA  G   |||||||||  |||||||| | |||||||| |||||||   |||| |||| |||||    || |  |||||  G   UACAGGGCU  GAGAUUCA A GCAAGGUA GGUUCGC   UAAC CCCG AGUGU    CG A  GUCUU  A CG         AA        A A        A       CCC    C    C     CACU  U GC     GG |
Stem-loop sequence | AUGUCCCGACACUCUAAGUCUCUGUUCCAUCCCAAGCGAAAAUUGAGGGCAUCACACAUGCUUACAGGAGAGGAGGUUCUGCGAUGCUCACUGUGACGCCCCCAAUCCCCGCUUGGAAUGGAACGAAAACUUAGAGAAUCGGGACAUGC |