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BaseInfo

ncRNA ID novel_jre_miR711
Species Juglans regia
Class miRNA
Genome position NW_017388934.1:895587-895659 [-]
Reference genome wgs.5d
Source SRR1170965
Length 24
Mature sequence(if miRNA) 50 - AAGGAAAAUGAUAGAGCCACCGCU - 73
Stem-loop(if miRNA) --       ---            CC  U          
  AAGGAAA   AUGAUAGAGCCA  GC GGUGGCUCCCG
  |||||||   ||||||||||||  || ||||||||||C
  UUUUUUU   UACUAUCUCGGU  UG CCACUGAGGGU
UA       GUA            --  -          
Stem-loop sequence AAGGAAAAUGAUAGAGCCACCGCUGGUGGCUCCCGCUGGGAGUCACCGUUGGCUCUAUCAUAUGUUUUUUUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018954783.1
ncRNA:24   UCGCCACCGAGAUAGUAAAAGGAA   1
  |*****|||||||||||||||||*
targets:1723   AUAAUGGGCUCUAUCAUUUUCCUC   1746

2.0 PREDICTED: Juglans regia uncharacterized LOC108983217 (LOC108983217), mRNA NA coding protein psRNATarget
XM_018956826.1
ncRNA:24   UCGCCACCGAGAUAGUAAAAGGAA   1
  *|=*|*||||||||||||||=|||
targets:95   CGUAGGGGCUCUAUCAUUUUUCUU   118

2.5 PREDICTED: Juglans regia putative phytosulfokines 6 (LOC108984776), mRNA NA coding protein psRNATarget