ncRNA ID | novel_jre_miR710 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017388926.1:1408571-1408733 [+] |
Reference genome | wgs.5d |
Source | SRR1170964;SRR1170965 |
Length | 24 |
Mature sequence(if miRNA) | 140 - CAUUCCACGAUUGUAUGUAGCAUU - 163 |
Stem-loop(if miRNA) |
--  A   U          -  C      UUA                     -  C -AAUAAAUA   GAUUCACCUGAAA   UG UAC UGCAGUCGUG AG GUGCAA   CCGUGCAGUCGUUUUGAAAAA AG G         AGG             A   || ||| |||||||||| || ||||||   ||||||||||||||||||||| || |         |||   AC AUG AUGUUAGCAC UU CACGUU   GGCACGUCAGCAAAACUUUUU UC C         UAA             G UU  G   U          C  A      UGC                     C  A CCCAGAUGA   UUUUUUAAUUAAA |
Stem-loop sequence | UGAUACUUGCAGUCGUGAGCGUGCAAUUACCGUGCAGUCGUUUUGAAAAAAGCGAAUAAAUAAGGGAUUCACCUGAAAAGAAAUUAAUUUUUUAAUAGUAGACCCCACUCUUUUUCAAAACGACUGCACGGCGUUUGCACAUUCCACGAUUGUAUGUAGCAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018970092.1 |
|
2.5 | PREDICTED: Juglans regia translation initiation factor eIF-2B subunit epsilon (LOC108994766), transcript variant X6, mRNA | NA | coding protein | psRNATarget |