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BaseInfo

ncRNA ID	novel_jre_miR706
Species	Juglans regia
Class	miRNA
Genome position	NW_017443629.1:1052695-1052822 [-]
Reference genome	wgs.5d
Source	SRR1170964
Length	24
Mature sequence(if miRNA)	105 - AAUAGACAAGUCUCAUACAAACCU - 128
Stem-loop(if miRNA)	--           -  C   C    -C         A     A  C    UUAA   A    UAAA   AAUAGACAAGU CU AUA AAAC  UUUGUAAAA AAUAG UC UACU    AAA AAUG    A   ||||||||||| || ||| ||||  ||||||||| ||||| || ||||    ||| ||||   UUAUCUGUUCA GA UAU UUUG  AAACAUUUU UUAUC AG GUGA    UUU UUAU    A GU           A  -   A    UA         G     C  U    -UUA   A    UAAA
Stem-loop sequence	AAUAGACAAGUCUCAUACAAACCUUUGUAAAAAAAUAGAUCCUACUUUAAAAAAAAUGUAAAAAAAAUUAUUAUUUAUUAGUGUGACCUAUUGUUUUACAAAAUGUUUAUAUAGAACUUGUCUAUUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018950717.1	ncRNA:24   UCCAAACAUACUCUGAACAGAUAA   1   =||*|||*|||||||||||||||| targets:1430   GGGCUUGCAUGAGACUUGUCUAUU   1453 Target Full Sequence	1.0	PREDICTED: Juglans regia aminotransferase ALD1-like (LOC108979924), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018950714.1	ncRNA:24   UCCAAACAUACUCUGAACAGAUAA   1   =||*|||*|||||||||||||||| targets:1918   GGGCUUGCAUGAGACUUGUCUAUU   1941 Target Full Sequence	1.0	PREDICTED: Juglans regia aminotransferase ALD1-like (LOC108979924), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018950716.1	ncRNA:24   UCCAAACAUACUCUGAACAGAUAA   1   =||*|||*|||||||||||||||| targets:2036   GGGCUUGCAUGAGACUUGUCUAUU   2059 Target Full Sequence	1.0	PREDICTED: Juglans regia aminotransferase ALD1-like (LOC108979924), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018971339.1	ncRNA:24   UCCAAACAUACUCUGAACAGAUAA   1   |*|*||||||||*||||||||||| targets:1047   AAGCUUGUAUGAAACUUGUCUAUU   1070 Target Full Sequence	1.5	PREDICTED: Juglans regia uncharacterized LOC108995726 (LOC108995726), mRNA	NA	coding protein	psRNATarget