ncRNA ID | novel_jre_miR698 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017388882.1:48938-49085 [-] |
Reference genome | wgs.5d |
Source | SRR1168880 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUGAUGAGAGUUGAGAUGAUGAAU - 24 |
Stem-loop(if miRNA) |
--                                      A  G       U      UGGAAAU  UU  UUA   UCAUCAUCUUAACUUUCAUCAUCCUUCCAUCAUUUUAU AU UGAUAUU GAUGAU       UA  UA   C   |||||||||||||||||||||||||||||||||||||| || ||||||| ||||||       ||  ||   AGUAGUAGAGUUGAGAGUAGUAGGAGGGUAGUAGGAUA UA ACUGUAA UUACUA       AU  AU   A UA                                      C  A       U      UAAAAAU  UC  UUU |
Stem-loop sequence | UCAUCAUCUUAACUUUCAUCAUCCUUCCAUCAUUUUAUAAUGUGAUAUUUGAUGAUUGGAAAUUAUUUAUUACAUUUUACUUAUAAAAAUAUCAUUUAAUGUCAAAUCAUAGGAUGAUGGGAGGAUGAUGAGAGUUGAGAUGAUGAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018983133.1 |
|
2.5 | PREDICTED: Juglans regia GDSL esterase/lipase At3g27950-like (LOC109004557), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_018950054.1 |
|
2.5 | PREDICTED: Juglans regia protein CONTINUOUS VASCULAR RING 1-like (LOC108979380), mRNA | NA | coding protein | psRNATarget |