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BaseInfo

ncRNA ID novel_jre_miR697
Species Juglans regia
Class miRNA
Genome position NW_017443285.1:25285-25396 [-]
Reference genome wgs.5d
Source SRR1170964;SRR1170965;SRR1170966
Length 24
Mature sequence(if miRNA) 1 - AUGAUUAUUGUAUUGUCUUGGCCU - 24
Stem-loop(if miRNA) --                                        ---     U   - AA
  GCCAAGACAAUACAAUAAUCAUCCUUAAGUAAUGUGAGAC   CUACU AAG C  U
  ||||||||||||||||||||||||||||||||||||||||   ||||| ||| |  G
  CGGUUCUGUUAUGUUAUUAGUAGGAAUUCGUUACACUCUG   GAUGA UUC G  U
UC                                        AAU     -   A AG
Stem-loop sequence GCCAAGACAAUACAAUAAUCAUCCUUAAGUAAUGUGAGACCUACUUAAGCAAUGUGAGACUUAGUAGUAAGUCUCACAUUGCUUAAGGAUGAUUAUUGUAUUGUCUUGGCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019003459.1
ncRNA:24   UCCGGUUCUGUUAUGUUAUUAGUA   1
  ****|||||||||||||||||*|*
targets:1171   UUAACAAGACAAUACAAUAAUAAG   1194

2.5 PREDICTED: Juglans regia peroxidase A2-like (LOC109020930), mRNA NA coding protein psRNATarget