ncRNA ID | novel_jre_miR696 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017440062.1:6606-6706 [+] |
Reference genome | wgs.5d |
Source | SRR1168880 |
Length | 20 |
Mature sequence(if miRNA) | 1 - UUAUCAUCUCUUCAUCAUCU - 20 |
Stem-loop(if miRNA) |
--       -   UU      -  CACU     A       CU   -U    C   UUAUCAU CUC  CAUCAU CU    AUAUG UAUUAGA  AUA  UUUA U   ||||||| |||  |||||| ||    ||||| |||||||  |||  ||||   AAUAGUA GAG  GUAGUA GA    UAUAU AUAAUCU  UAU  AAAU U AG       A   -U      A  -UAU     C       AU   CU    A |
Stem-loop sequence | UUAUCAUCUCUUCAUCAUCUCACUAUAUGAUAUUAGACUAUAUUUUACUUAUAAAUCUAUUAUCUAAUACUAUAUUAUAGAAUGAUGUGAGAAUGAUAAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018973763.1 |
|
2.5 | PREDICTED: Juglans regia pentatricopeptide repeat-containing protein At3g46870-like (LOC108997457), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_018956201.1 |
|
2.5 | PREDICTED: Juglans regia uncharacterized LOC108984297 (LOC108984297), mRNA | NA | coding protein | psRNATarget |