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BaseInfo

ncRNA ID novel_jre_miR686
Species Juglans regia
Class miRNA
Genome position NW_017440333.1:12106-12155 [-]
Reference genome wgs.5d
Source SRR1170964
Length 24
Mature sequence(if miRNA) 27 - AAGGGGACUGAGACAGGGAGAUCC - 50
Stem-loop(if miRNA) --       CU    C        C
  AAGGGGA  GAGA AGGGAGAU C
  |||||||  |||| |||||||| C
  UUUUCCU  CUCU UUCCUCUA U
UG       -U    A        U
Stem-loop sequence AAGGGGACUGAGACAGGGAGAUCCCUUAUCUCCUUAUCUCUUCCUUUUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018953488.1
ncRNA:24   CCUAGAGGGACAGAGUCAGGGGAA   1
  *|||=|||||*||*||||||||||
targets:89   CGAUUUCCCUCUCGCAGUCCCCUU   112

2.5 PREDICTED: Juglans regia putative pentatricopeptide repeat-containing protein At5g43820 (LOC108982187), transcript variant X2, mRNA NA coding protein psRNATarget
XM_018999462.1
ncRNA:24   CCUAGAGGGACAGAGUCAGGGGAA   1
  *|||=|||||*||*||||||||||
targets:89   CGAUUUCCCUCUCGCAGUCCCCUU   112

2.5 PREDICTED: Juglans regia putative pentatricopeptide repeat-containing protein At5g43820 (LOC109017156), transcript variant X2, mRNA NA coding protein psRNATarget
XM_019000197.1
ncRNA:24   CCUAGAGGGACAGAGUCAGGGGAA   1
  *|||=|||||*||*||||||||||
targets:89   CGAUUUCCCUCUCGCAGUCCCCUU   112

2.5 PREDICTED: Juglans regia putative pentatricopeptide repeat-containing protein At5g43820 (LOC109018011), transcript variant X2, mRNA NA coding protein psRNATarget
XM_019005068.1
ncRNA:24   CCUAGAGGGACAGAGUCAGGGGAA   1
  *|||=|||||*||*||||||||||
targets:89   CGAUUUCCCUCUCGCAGUCCCCUU   112

2.5 PREDICTED: Juglans regia putative pentatricopeptide repeat-containing protein At5g43820 (LOC109022226), transcript variant X2, mRNA NA coding protein psRNATarget
XM_019000198.1
ncRNA:24   CCUAGAGGGACAGAGUCAGGGGAA   1
  *|||=|||||*||*||||||||||
targets:89   CGAUUUCCCUCUCGCAGUCCCCUU   112

2.5 PREDICTED: Juglans regia putative pentatricopeptide repeat-containing protein At5g43820 (LOC109018011), transcript variant X3, mRNA NA coding protein psRNATarget
XM_018999463.1
ncRNA:24   CCUAGAGGGACAGAGUCAGGGGAA   1
  *|||=|||||*||*||||||||||
targets:89   CGAUUUCCCUCUCGCAGUCCCCUU   112

2.5 PREDICTED: Juglans regia putative pentatricopeptide repeat-containing protein At5g43820 (LOC109017156), transcript variant X3, mRNA NA coding protein psRNATarget
XM_018953489.1
ncRNA:24   CCUAGAGGGACAGAGUCAGGGGAA   1
  *|||=|||||*||*||||||||||
targets:89   CGAUUUCCCUCUCGCAGUCCCCUU   112

2.5 PREDICTED: Juglans regia putative pentatricopeptide repeat-containing protein At5g43820 (LOC108982187), transcript variant X3, mRNA NA coding protein psRNATarget
XM_019005069.1
ncRNA:24   CCUAGAGGGACAGAGUCAGGGGAA   1
  *|||=|||||*||*||||||||||
targets:89   CGAUUUCCCUCUCGCAGUCCCCUU   112

2.5 PREDICTED: Juglans regia putative pentatricopeptide repeat-containing protein At5g43820 (LOC109022226), transcript variant X3, mRNA NA coding protein psRNATarget
XM_018953490.1
ncRNA:24   CCUAGAGGGACAGAGUCAGGGGAA   1
  *|||=|||||*||*||||||||||
targets:89   CGAUUUCCCUCUCGCAGUCCCCUU   112

2.5 PREDICTED: Juglans regia putative pentatricopeptide repeat-containing protein At5g43820 (LOC108982187), transcript variant X4, mRNA NA coding protein psRNATarget
XM_018999464.1
ncRNA:24   CCUAGAGGGACAGAGUCAGGGGAA   1
  *|||=|||||*||*||||||||||
targets:89   CGAUUUCCCUCUCGCAGUCCCCUU   112

2.5 PREDICTED: Juglans regia putative pentatricopeptide repeat-containing protein At5g43820 (LOC109017156), transcript variant X4, mRNA NA coding protein psRNATarget
XM_019005070.1
ncRNA:24   CCUAGAGGGACAGAGUCAGGGGAA   1
  *|||=|||||*||*||||||||||
targets:89   CGAUUUCCCUCUCGCAGUCCCCUU   112

2.5 PREDICTED: Juglans regia putative pentatricopeptide repeat-containing protein At5g43820 (LOC109022226), transcript variant X4, mRNA NA coding protein psRNATarget
XM_019000199.1
ncRNA:24   CCUAGAGGGACAGAGUCAGGGGAA   1
  *|||=|||||*||*||||||||||
targets:89   CGAUUUCCCUCUCGCAGUCCCCUU   112

2.5 PREDICTED: Juglans regia putative pentatricopeptide repeat-containing protein At5g43820 (LOC109018011), transcript variant X4, mRNA NA coding protein psRNATarget
XM_018953487.1
ncRNA:24   CCUAGAGGGACAGAGUCAGGGGAA   1
  *|||=|||||*||*||||||||||
targets:89   CGAUUUCCCUCUCGCAGUCCCCUU   112

2.5 PREDICTED: Juglans regia putative pentatricopeptide repeat-containing protein At5g43820 (LOC108982187), transcript variant X1, mRNA NA coding protein psRNATarget
XM_019005067.1
ncRNA:24   CCUAGAGGGACAGAGUCAGGGGAA   1
  *|||=|||||*||*||||||||||
targets:89   CGAUUUCCCUCUCGCAGUCCCCUU   112

2.5 PREDICTED: Juglans regia putative pentatricopeptide repeat-containing protein At5g43820 (LOC109022226), transcript variant X1, mRNA NA coding protein psRNATarget
XM_018999461.1
ncRNA:24   CCUAGAGGGACAGAGUCAGGGGAA   1
  *|||=|||||*||*||||||||||
targets:89   CGAUUUCCCUCUCGCAGUCCCCUU   112

2.5 PREDICTED: Juglans regia putative pentatricopeptide repeat-containing protein At5g43820 (LOC109017156), transcript variant X1, mRNA NA coding protein psRNATarget
XM_019000195.1
ncRNA:24   CCUAGAGGGACAGAGUCAGGGGAA   1
  *|||=|||||*||*||||||||||
targets:89   CGAUUUCCCUCUCGCAGUCCCCUU   112

2.5 PREDICTED: Juglans regia putative pentatricopeptide repeat-containing protein At5g43820 (LOC109018011), transcript variant X1, mRNA NA coding protein psRNATarget
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