ncRNA ID | novel_jre_miR683 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017439255.1:35573-35700 [-] |
Reference genome | wgs.5d |
Source | SRR1170964;SRR1170966 |
Length | 24 |
Mature sequence(if miRNA) | 105 - AAUGUAUAAACUUUGCAUAAGCCU - 128 |
Stem-loop(if miRNA) |
--AAUG     AC        A      UG      -U   AG   C    AU        A U       UAUAA  UUUGCAUA GCCUUU  UAAAAA  GUG  UUC AUCA  AAAAAGUG G U       |||||  |||||||| ||||||  ||||||  |||  ||| ||||  |||||||| | U       AUGUU  GAAUGUGU CGGAAA  AUUUUU  CAU  GAG UGGU  UUUUUUAU U U GUUUAA     CA        A      GU      UU   CU   A    AC        A U |
Stem-loop sequence | AAUGUAUAAACUUUGCAUAAGCCUUUUGUAAAAAUGUGAGUUCCAUCAAUAAAAAGUGAGUUUUUUAUAUUUUUUCAUGGUAGAGUCUACUUUUUUUAUGAAAGGCAUGUGUAAGACUUGUAAAUUUG |