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BaseInfo

ncRNA ID novel_jre_miR683
Species Juglans regia
Class miRNA
Genome position NW_017439255.1:35573-35700 [-]
Reference genome wgs.5d
Source SRR1170964;SRR1170966
Length 24
Mature sequence(if miRNA) 105 - AAUGUAUAAACUUUGCAUAAGCCU - 128
Stem-loop(if miRNA) --AAUG     AC        A      UG      -U   AG   C    AU        A U
      UAUAA  UUUGCAUA GCCUUU  UAAAAA  GUG  UUC AUCA  AAAAAGUG G U
      |||||  |||||||| ||||||  ||||||  |||  ||| ||||  |||||||| | U
      AUGUU  GAAUGUGU CGGAAA  AUUUUU  CAU  GAG UGGU  UUUUUUAU U U
GUUUAA     CA        A      GU      UU   CU   A    AC        A U
Stem-loop sequence AAUGUAUAAACUUUGCAUAAGCCUUUUGUAAAAAUGUGAGUUCCAUCAAUAAAAAGUGAGUUUUUUAUAUUUUUUCAUGGUAGAGUCUACUUUUUUUAUGAAAGGCAUGUGUAAGACUUGUAAAUUUG