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BaseInfo

ncRNA ID novel_jre_miR671
Species Juglans regia
Class miRNA
Genome position NW_017388855.1:279597-279741 [+]
Reference genome wgs.5d
Source SRR1170964
Length 24
Mature sequence(if miRNA) 122 - AAUAGGUGUGCAGGAUGUAAGGCU - 145
Stem-loop(if miRNA) --                 UC C            C                AUAUUUUACUUACAAA     -C     U
  CCUUGCAUCUUGCACAC  A UUAAAAAUAUGU AUUUUACCUUUUUAUU                UAUGU  UGAAA C
  |||||||||||||||||  | |||||||||||| ||||||||||||||||                |||||  |||||
  GGAAUGUAGGACGUGUG  U AAUUUUUAUAUA UGAAAUGGAAAAAUGG                GUGCA  ACUUU A
UC                 GA A            A                ----------------     UU     U
Stem-loop sequence CCUUGCAUCUUGCACACUCACUUAAAAAUAUGUCAUUUUACCUUUUUAUUAUAUUUUACUUACAAAUAUGUCUGAAAUCAUUUUCAUUACGUGGGUAAAAAGGUAAAGUAAUAUAUUUUUAAAUAGGUGUGCAGGAUGUAAGGCU