ncRNA ID | novel_jre_miR671 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017388855.1:279597-279741 [+] |
Reference genome | wgs.5d |
Source | SRR1170964 |
Length | 24 |
Mature sequence(if miRNA) | 122 - AAUAGGUGUGCAGGAUGUAAGGCU - 145 |
Stem-loop(if miRNA) |
--                 UC C            C                AUAUUUUACUUACAAA     -C     U   CCUUGCAUCUUGCACAC  A UUAAAAAUAUGU AUUUUACCUUUUUAUU                UAUGU  UGAAA C   |||||||||||||||||  | |||||||||||| ||||||||||||||||                |||||  |||||   GGAAUGUAGGACGUGUG  U AAUUUUUAUAUA UGAAAUGGAAAAAUGG                GUGCA  ACUUU A UC                 GA A            A                ----------------     UU     U |
Stem-loop sequence | CCUUGCAUCUUGCACACUCACUUAAAAAUAUGUCAUUUUACCUUUUUAUUAUAUUUUACUUACAAAUAUGUCUGAAAUCAUUUUCAUUACGUGGGUAAAAAGGUAAAGUAAUAUAUUUUUAAAUAGGUGUGCAGGAUGUAAGGCU |