ncRNA ID | novel_jre_miR668 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017389943.1:52111-52240 [-] |
Reference genome | wgs.5d |
Source | SRR1170964 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUUACGCGGCGAUUAUGCAAUUCA - 24 |
Stem-loop(if miRNA) |
--AAG       C                         ----------           U  U      U      UGCGUAA CGCCGCGUAAUCGCUUUGAAAAAGA          GUGGGAUCCAC AU AAAAAA U      ||||||| |||||||||||||||||||||||||          ||||||||||| || |||||| A      ACGUAUU GCGGCGCAUUAGCGAAACUUUUUUU          UACCCUGGGUG UA UUUUUU A ACUUA       A                         ACUUAUUUUG           -  C      U |
Stem-loop sequence | AAGUGCGUAACCGCCGCGUAAUCGCUUUGAAAAAGAGUGGGAUCCACUAUUAAAAAAUUAAUUUUUUUCAUGUGGGUCCCAUGUUUUAUUCAUUUUUUUCAAAGCGAUUACGCGGCGAUUAUGCAAUUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018987355.1 |
|
2.5 | PREDICTED: Juglans regia 7-deoxyloganetin glucosyltransferase-like (LOC109007610), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_018953401.1 |
|
2.5 | PREDICTED: Juglans regia receptor protein kinase CLAVATA1-like (LOC108982113), mRNA | NA | coding protein | psRNATarget |