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BaseInfo

ncRNA ID novel_jre_miR666
Species Juglans regia
Class miRNA
Genome position NW_017389897.1:57749-57858 [+]
Reference genome wgs.5d
Source SRR1170964;SRR1170965
Length 24
Mature sequence(if miRNA) 87 - UUUCGAAGUGAUUGCACGGCGCUU - 110
Stem-loop(if miRNA) --  A          C          ---     ------  U    -C  U     UAU
  GC CCGUGCAAUC UUUUGAAAAA   GAGUA      GG CUCA  UA UAAAA   U
  || |||||||||| ||||||||||   |||||      || ||||  || |||||
  CG GGCACGUUAG GAAGCUUUUU   CUCAU      CC GAGU  AU AUUUU   A
UU  C          U          UCA     UUAUAC  U    UU  U     UUG
Stem-loop sequence GCACCGUGCAAUCCUUUUGAAAAAGAGUAGGUCUCACUAUUAAAAUAUUAGUUUUUUAUUAUUUGAGUCCCAUAUUUACUCACUUUUUUCGAAGUGAUUGCACGGCGCUU