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BaseInfo

ncRNA ID novel_jre_miR661
Species Juglans regia
Class miRNA
Genome position NW_017389499.1:185124-185294 [+]
Reference genome wgs.5d
Source SRR1170964
Length 24
Mature sequence(if miRNA) 148 - AAAAUCAACUGCAUUGGACUAGCC - 171
Stem-loop(if miRNA) --   C          A  AU       UUACUCA  -          -  A   ACU A          AG     A C   A   U
  CUA UUCAAUGUAG UU  UUUUGAG       GG CAAAAUUUGA CU GGC   G CAUUUGGCUA  CCAAU C AUU UUU U
  ||| |||||||||| ||  |||||||       || |||||||||| || |||   | ||||||||||  ||||| | ||| |||
  GAU AGGUUACGUC AA  AAAACUU       UC GUUUUAAACU GA CCG   C GUAAACCGAU  GGUUA G UAA GAG U
CC   C          -  CU       UUUUUAA  A          U  A   -AU -          CA     C A   C   A
Stem-loop sequence CUACUUCAAUGUAGAUUAUUUUUGAGUUACUCAGGCAAAAUUUGACUAGGCACUGACAUUUGGCUAAGCCAAUACCAUUAUUUUUUAGAGCAAUAGCAUUGGACUAGCCAAAUGCUAGCCAAGUUCAAAUUUUGACUAAUUUUUUUCAAAAUCAACUGCAUUGGACUAGCC