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BaseInfo

ncRNA ID	novel_jre_miR656
Species	Juglans regia
Class	miRNA
Genome position	NW_017389573.1:63907-64051 [+]
Reference genome	wgs.5d
Source	SRR1170963
Length	22
Mature sequence(if miRNA)	1 - AGUCGUGAGUGUGCAAGUGUCA - 22
Stem-loop(if miRNA)	--      -     UG       CA  CAAUC           -      UAAA    AGACCCACAUGAAAA   AGUCGU GAGUG  CAAGUGU  UG     AUUUUGAAAAA AAUGAA    UAUG               A   |||||| |||||  |||||||  ||     ||||||||||| ||||||    ||||               A   UCAGCA CUCAC  GUUUAUA  AC     UAAAACUUUUU UUACUU    UAAU               A UG      U     GU       AC  AUCAU           C      CAGA    AAUUUUUUUAUUAAA
Stem-loop sequence	AGUCGUGAGUGUGCAAGUGUCAUGCAAUCAUUUUGAAAAAAAUGAAUAAAUAUGAGACCCACAUGAAAAAAAAAAUUAUUUUUUUAAUAAUAGACUUCAUUCUUUUUCAAAAUUACUACACAAUAUUUGUGCACUCUACGACUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_019004598.1	ncRNA:22   ACUGUGAACGUGUGAGUGCUGA   1   *|=|=|||||||||||||*||| targets:1374   CGGCGCUUGCACACUCACAACU   1395 Target Full Sequence	2.5	PREDICTED: Juglans regia branched-chain-amino-acid aminotransferase 2, chloroplastic-like (LOC109021870), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019004597.1	ncRNA:22   ACUGUGAACGUGUGAGUGCUGA   1   *|=|=|||||||||||||*||| targets:1493   CGGCGCUUGCACACUCACAACU   1514 Target Full Sequence	2.5	PREDICTED: Juglans regia branched-chain-amino-acid aminotransferase 2, chloroplastic-like (LOC109021870), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018974036.1	ncRNA:22   ACUGUGAACGUGUGAGUGCUGA   1   ***=||||||||||||||||=| targets:1761   CUUUACUUGCACACUCACGAUU   1782 Target Full Sequence	2.5	PREDICTED: Juglans regia aspartyl protease family protein 1-like (LOC108997682), mRNA	NA	coding protein	psRNATarget