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BaseInfo

ncRNA ID novel_jre_miR647
Species Juglans regia
Class miRNA
Genome position NW_017443620.1:741410-741565 [+]
Reference genome wgs.5d
Source SRR1170963
Length 24
Mature sequence(if miRNA) 133 - AUGUAGGGAUGUUAAGUAGAAUUU - 156
Stem-loop(if miRNA) --AUG       U          C          C                  AU             CACAC    CA
     CUACUUA CAUCCUUACA CAUAUAUCAA AUGUGAUUUGUCAUUUUU  CAUUUUAUUUAAA     ACAU  A
     ||||||| |||||||||| |||||||||| ||||||||||||||||||  |||||||||||||     ||||
     GAUGAAU GUAGGGAUGU GUAUGUGGUU UAUAUUAAAUAGUAAAAA  GUAAGAUAAAUUU     UGUA  U
UUUAA       U          A          A                  CG             --AUA    UA
Stem-loop sequence AUGCUACUUAUCAUCCUUACACCAUAUAUCAACAUGUGAUUUGUCAUUUUUAUCAUUUUAUUUAAACACACACAUCAAUAUAUGUAUAUUUAAAUAGAAUGGCAAAAAUGAUAAAUUAUAUAUUGGUGUAUGAUGUAGGGAUGUUAAGUAGAAUUU