ncRNA ID | novel_jre_miR647 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017443620.1:741410-741565 [+] |
Reference genome | wgs.5d |
Source | SRR1170963 |
Length | 24 |
Mature sequence(if miRNA) | 133 - AUGUAGGGAUGUUAAGUAGAAUUU - 156 |
Stem-loop(if miRNA) |
--AUG       U          C          C                  AU             CACAC    CA      CUACUUA CAUCCUUACA CAUAUAUCAA AUGUGAUUUGUCAUUUUU  CAUUUUAUUUAAA     ACAU  A      ||||||| |||||||||| |||||||||| ||||||||||||||||||  |||||||||||||     ||||      GAUGAAU GUAGGGAUGU GUAUGUGGUU UAUAUUAAAUAGUAAAAA  GUAAGAUAAAUUU     UGUA  U UUUAA       U          A          A                  CG             --AUA    UA |
Stem-loop sequence | AUGCUACUUAUCAUCCUUACACCAUAUAUCAACAUGUGAUUUGUCAUUUUUAUCAUUUUAUUUAAACACACACAUCAAUAUAUGUAUAUUUAAAUAGAAUGGCAAAAAUGAUAAAUUAUAUAUUGGUGUAUGAUGUAGGGAUGUUAAGUAGAAUUU |