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BaseInfo

ncRNA ID	novel_jre_miR645
Species	Juglans regia
Class	miRNA
Genome position	NW_017443603.1:1476310-1476474 [-]
Reference genome	wgs.5d
Source	SRR1170963;SRR1170969;SRR1168881
Length	24
Mature sequence(if miRNA)	1 - AUUCCAUGACUGUAUGUAGCAUUA - 24
Stem-loop(if miRNA)	--   A   U          A C    --AGU A       A             -   AAAUAAAUAA   AC    -CUG      AA   AUG UAC UGCAGUCGUG G GUGC     C CCGUGCA UCGCUUUGAAAAA AGU          GGG  CCAC    AAAAGA  U   ||| ||| |||||||||| | ||||     | ||||||| ||||||||||||| |||          |||  ||||    ||||||   UAC AUG AUGUCAGUAC C UACG     G GGCACGU AGCGAAACUUUUU UCA          CCC  GGUG    UUUUUU  U AU   G   U          - U    CAUUU C       C             C   ----------   CA    AUAA      AA
Stem-loop sequence	AUGAUACUUGCAGUCGUGAGCGUGCAGUCACCGUGCAAUCGCUUUGAAAAAAGUAAAUAAAUAAGGGACCCACCUGAAAAGAAAUUAAUUUUUUAAUAGUGGACCCCACUCUUUUUCAAAGCGACUGCACGGCGUUUACGCAUUCCAUGACUGUAUGUAGCAUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018964869.1	ncRNA:24   AUUACGAUGUAUGUCAGUACCUUA   1   ||||||||||||||||=||||||| targets:1051   UAAUGCUACAUACAGUUAUGGAAU   1074 Target Full Sequence	1.5	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC108990784), mRNA	NA	coding protein	psRNATarget
XM_018980788.1	ncRNA:24   AUUACGAUGUAUGUCAGUACCUUA   1   ||||||||||||||||=||||||| targets:1580   UAAUGCUACAUACAGUUAUGGAAU   1603 Target Full Sequence	1.5	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC109002870), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_018980787.1	ncRNA:24   AUUACGAUGUAUGUCAGUACCUUA   1   ||||||||||||||||=||||||| targets:1653   UAAUGCUACAUACAGUUAUGGAAU   1676 Target Full Sequence	1.5	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC109002870), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018980786.1	ncRNA:24   AUUACGAUGUAUGUCAGUACCUUA   1   ||||||||||||||||=||||||| targets:1877   UAAUGCUACAUACAGUUAUGGAAU   1900 Target Full Sequence	1.5	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC109002870), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018969255.1	ncRNA:24   AUUACGAUGUAUGUCAGUACCUUA   1   |||||=||||||||||||||||=| targets:1886   UAAUGUUACAUACAGUCAUGGAGU   1909 Target Full Sequence	2.5	PREDICTED: Juglans regia CTP synthase-like (LOC108994151), transcript variant X1, mRNA	NA	coding protein	psRNATarget