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BaseInfo

ncRNA ID	novel_jre_miR644
Species	Juglans regia
Class	miRNA
Genome position	NW_017443598.1:183644-183771 [-]
Reference genome	wgs.5d
Source	SRR1170963
Length	24
Mature sequence(if miRNA)	1 - GAUUGCACGGCGCUUGCACACUCA - 24
Stem-loop(if miRNA)	--   ACA                            ---------A      UC   UAUU   A  U   AGU   UAAGCGUCGUGCAGUCGCUUUGAAAAAG          GUGAGA  UAC    AAA AA U   |||   ||||||||||||||||||||||||||||          ||||||  |||    ||| || A   UCA   GUUCGCGGCACGUUAGCGAAACUUUUUU          UACUCU  AUG    UUU UU A AC   CAC                            CACUUAUUUA      GA   UACU   C  U
Stem-loop sequence	AGUACAUAAGCGUCGUGCAGUCGCUUUGAAAAAGAGUGAGAUCUACUAUUAAAAAAUUAAUUUCUUUUCAUGUAAGUCUCAUAUUUAUUCACUUUUUUCAAAGCGAUUGCACGGCGCUUGCACACUCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018964869.1	ncRNA:24   ACUCACACGUUCGCGGCACGUUAG   1   *||*||*||||||||||||||=|| targets:1070   GGAAUGCGCAAGCGCCGUGCAGUC   1093 Target Full Sequence	2.5	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC108990784), mRNA	NA	coding protein	psRNATarget
XM_018980788.1	ncRNA:24   ACUCACACGUUCGCGGCACGUUAG   1   *||*||*||||||||||||||=|| targets:1599   GGAAUGCGCAAGCGCCGUGCAGUC   1622 Target Full Sequence	2.5	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC109002870), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_018980787.1	ncRNA:24   ACUCACACGUUCGCGGCACGUUAG   1   *||*||*||||||||||||||=|| targets:1672   GGAAUGCGCAAGCGCCGUGCAGUC   1695 Target Full Sequence	2.5	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC109002870), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018980786.1	ncRNA:24   ACUCACACGUUCGCGGCACGUUAG   1   *||*||*||||||||||||||=|| targets:1896   GGAAUGCGCAAGCGCCGUGCAGUC   1919 Target Full Sequence	2.5	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC109002870), transcript variant X1, mRNA	NA	coding protein	psRNATarget