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BaseInfo

ncRNA ID novel_jre_miR643
Species Juglans regia
Class miRNA
Genome position NW_017443575.1:162170-162301 [-]
Reference genome wgs.5d
Source SRR1170963
Length 22
Mature sequence(if miRNA) 1 - UAUACCGGCACAUUUUUAUCGC - 22
Stem-loop(if miRNA) --                       C   CA         AAAA              -G    UG
  GAUAAAAAUGUGCCGGUAUAGAU AAU  CAGCGAUUU    GUCGCUGCAAUUGA  UUAU  G
  ||||||||||||||||||||||| |||  |||||||||    ||||||||||||||  ||||  U
  CUAUUUUUACACGGCCAUAUCUA UUA  GUCGCUAAA    UAGCGACGUUAACU  AGUG  U
CG                       A   UG         AUAC              GA    UU
Stem-loop sequence GAUAAAAAUGUGCCGGUAUAGAUCAAUCACAGCGAUUUAAAAGUCGCUGCAAUUGAGUUAUUGGUUUUGUGAAGUCAAUUGCAGCGAUCAUAAAAUCGCUGGUAUUAAUCUAUACCGGCACAUUUUUAUCGC