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BaseInfo

ncRNA ID novel_jre_miR642
Species Juglans regia
Class miRNA
Genome position NW_017443563.1:180862-180969 [-]
Reference genome wgs.5d
Source SRR1170963;SRR1168881
Length 24
Mature sequence(if miRNA) 1 - AAAUCUCUGUGGAUGCGCCCGAGG - 24
Stem-loop(if miRNA) --   U   -    G  C      AUUA   A    A    ---G AUG     CUU
  UUG GGU UAUU AC GAGAUU    UGA UAAU GAAU    C   UUAUC   A
  ||| ||| |||| || ||||||    ||| |||| ||||    |   |||||   G
  AGC CCG GUAG UG CUCUAA    ACU AUUG CUUG    G   AGUAG   A
GG   -   C    G  U      --AC   C    G    AAAA GUA     AUU
Stem-loop sequence UUGUGGUUAUUGACCGAGAUUAUUAUGAAUAAUAGAAUGCAUGUUAUCCUUAGAUUAGAUGAAUGGAAAAGUUCGGUUACUCACAAAUCUCUGUGGAUGCGCCCGAGG