ncRNA ID | novel_jre_miR636 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017430248.1:847-1011 [-] |
Reference genome | wgs.5d |
Source | SRR1168880 |
Length | 23 |
Mature sequence(if miRNA) | 1 - UUAGGAUGAUGAGUAGUAUUACU - 23 |
Stem-loop(if miRNA) |
--A   -                                      UC         A          A  UUCAUAAG  AAA    AAU CUAUUCAUCAUCUUAACUUCUAUUAUCCUCUCAUCAUC  AUGAUGUGG AUUAAAUGAU GG        UA   U    ||| ||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||| ||        ||    UUA GAUGAGUAGUAGGAUUGAAGGUAGUAGGAGAGUAGUAG  UACUAUACC UAAUUUACUA CC        AU   A UCA   U                                      GA         G          A  UCUAAUAA  AAU |
Stem-loop sequence | AAAUCUAUUCAUCAUCUUAACUUCUAUUAUCCUCUCAUCAUCUCAUGAUGUGGAAUUAAAUGAUAGGUUCAUAAGUAAAAUAUAAUAAAUAAUCUCCAAUCAUUUAAUGCCAUAUCAUAGGAUGAUGAGAGGAUGAUGGAAGUUAGGAUGAUGAGUAGUAUUACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018964604.1 |
|
1.0 | PREDICTED: Juglans regia sugar carrier protein C (LOC108990598), mRNA | NA | coding protein | psRNATarget |