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BaseInfo

ncRNA ID novel_jre_miR636
Species Juglans regia
Class miRNA
Genome position NW_017430248.1:847-1011 [-]
Reference genome wgs.5d
Source SRR1168880
Length 23
Mature sequence(if miRNA) 1 - UUAGGAUGAUGAGUAGUAUUACU - 23
Stem-loop(if miRNA) --A   -                                      UC         A          A  UUCAUAAG  AAA
   AAU CUAUUCAUCAUCUUAACUUCUAUUAUCCUCUCAUCAUC  AUGAUGUGG AUUAAAUGAU GG        UA   U
   ||| ||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||| ||        ||
   UUA GAUGAGUAGUAGGAUUGAAGGUAGUAGGAGAGUAGUAG  UACUAUACC UAAUUUACUA CC        AU   A
UCA   U                                      GA         G          A  UCUAAUAA  AAU
Stem-loop sequence AAAUCUAUUCAUCAUCUUAACUUCUAUUAUCCUCUCAUCAUCUCAUGAUGUGGAAUUAAAUGAUAGGUUCAUAAGUAAAAUAUAAUAAAUAAUCUCCAAUCAUUUAAUGCCAUAUCAUAGGAUGAUGAGAGGAUGAUGGAAGUUAGGAUGAUGAGUAGUAUUACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018964604.1
ncRNA:23   UCAUUAUGAUGAGUAGUAGGAUU   1
  ||||||*||||||||||||||||
targets:1938   AGUAAUUCUACUCAUCAUCCUAA   1960

1.0 PREDICTED: Juglans regia sugar carrier protein C (LOC108990598), mRNA NA coding protein psRNATarget